RNA–Protein interactions for RNA: ENST00000596726.3

PNKP-209, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 637 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-209ENST00000596726 IZUMO2Q6UXV1 221 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 ASCL4Q6XD76 172 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 GDPD3Q7L5L3 318 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 SATL1Q86VE3 508 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 SLC25A28Q96A46 364 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 ORAI1Q96D31 301 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 DUSP21Q9H596 190 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 PCDHGB5Q9Y5G0 923 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 TENM1Q9UKZ4 2725 aa17.24■□□□□ 0.35
PNKP-209ENST00000596726 PNMA8CA0A1B0GUJ8 204 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 C17orf98A8MV24 154 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 NPFFO15130 113 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 OR2H2O95918 312 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 GABRR1P24046 479 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 EEF1B2P24534 225 aaKnown RBP17.23■□□□□ 0.35
PNKP-209ENST00000596726 OR3A1P47881 315 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 HSPA13P48723 471 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 MTNR1BP49286 362 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 PPP3R1P63098 170 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 MEF2CQ06413 473 aaPredicted RBP17.23■□□□□ 0.35
PNKP-209ENST00000596726 IRF3Q14653 427 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 Q6P435 159 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 TCF23Q7RTU1 214 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 LDLRAD3Q86YD5 345 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 TMEM86BQ8N661 226 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 Q8NFD4 153 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 OR4S1Q8NGB4 309 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 TNFAIP8L1Q8WVP5 186 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 MND1Q9BWT6 205 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 CHST6Q9GZX3 395 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 EXOSC4Q9NPD3 245 aaKnown RBP17.23■□□□□ 0.35
PNKP-209ENST00000596726 LSM2Q9Y333 95 aaKnown RBP17.23■□□□□ 0.35
PNKP-209ENST00000596726 TPRKBQ9Y3C4 175 aa17.23■□□□□ 0.35
PNKP-209ENST00000596726 MGST3O14880 152 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 HKR1P10072 659 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 FSTP19883 344 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 BDKRB2P30411 391 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 BMXP51813 675 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 EDDM3BP56851 147 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 ERVFRD-1P60508 538 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 GRK1Q15835 563 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 PNKDQ8N490 385 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 PPP1R35Q8TAP8 253 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 GCDHQ92947 438 aaPredicted RBP17.22■□□□□ 0.35
PNKP-209ENST00000596726 GPER1Q99527 375 aa17.22■□□□□ 0.35
PNKP-209ENST00000596726 SF3B6Q9Y3B4 125 aaKnown RBP17.22■□□□□ 0.35
PNKP-209ENST00000596726 KIAA2026Q5HYC2 2103 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 TRAV8-7A0A075B6U6 113 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 A0A0G2JK05 382 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 A0A1W2PRD5 423 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 A0A1W2PRF3 423 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 A0A1W2PRM7 423 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 SIRPB1O00241 398 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 ERP29P30040 261 aaKnown RBP17.21■□□□□ 0.35
PNKP-209ENST00000596726 ZNF93P35789 620 aaPredicted RBP17.21■□□□□ 0.35
PNKP-209ENST00000596726 PTGFRP43088 359 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 EDDM3AQ14507 147 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 DDI2Q5TDH0 399 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 C16orf87Q6PH81 154 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 OR51T1Q8NGJ9 327 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 DERL3Q96Q80 235 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 OR14A2Q96R54 314 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 OR5M11Q96RB7 305 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 NKX3-1Q99801 234 aaPredicted RBP17.21■□□□□ 0.35
PNKP-209ENST00000596726 POMT1Q9Y6A1 747 aa17.21■□□□□ 0.35
PNKP-209ENST00000596726 hCG_1809904A0A1W2PP81 198 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 A0A1W2PPE2 198 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 A0A1W2PR64 198 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 A0A1W2PRV1 198 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 PIN1P1O15428 100 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 RBP4P02753 201 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 ZNF728P0DKX0 622 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 CRHBPP24387 322 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 SAA4P35542 130 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 TGFBR2P37173 567 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 OR3A4PP47883 348 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 SPHARQ15513 63 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 TPRX1Q8N7U7 411 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 CHST4Q8NCG5 386 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 SSMEM1Q8WWF3 244 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 HEXA-AS1Q9H8Q6 139 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 IL36GQ9NZH8 169 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 FOXJ3Q9UPW0 622 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 FAM96BQ9Y3D0 163 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 LINC00312Q9Y6C7 94 aa17.2■□□□□ 0.34
PNKP-209ENST00000596726 A0A1W2PPK0 400 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 hADV38S2A0JD32 116 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 MEIOCA2RUB1 952 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 MAGEA13PA6NCF6 341 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 SLC33A1O00400 549 aaPredicted RBP17.19■□□□□ 0.34
PNKP-209ENST00000596726 FBP1P09467 338 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 IER3P46695 156 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 MIDNQ504T8 468 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 UNQ9370/PRO34162Q6UXP9 181 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 C12orf54Q6X4T0 127 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 AJUBAQ96IF1 538 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 ZNF184Q99676 751 aaPredicted RBP17.19■□□□□ 0.34
PNKP-209ENST00000596726 FAM192AQ9GZU8 254 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 ZNRD1Q9P1U0 126 aa17.19■□□□□ 0.34
PNKP-209ENST00000596726 CKLFQ9UBR5 152 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms