RNA–Protein interactions for RNA: ENST00000595758.5

LIG1-208, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 606 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-208ENST00000595758 CSTBP04080 98 aaKnown RBP11.86□□□□□ -0.51
LIG1-208ENST00000595758 PPIAL4GP0DN37 164 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 SRD5A1P18405 259 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 GALP22466 123 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 GPR176Q14439 515 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 AWAT2Q6E213 333 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 OSR2Q8N2R0 312 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 OR4D6Q8NGJ1 314 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 OR51T1Q8NGJ9 327 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 OR5D13Q8NGL4 314 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 C8orf46Q8TAG6 207 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 NANPQ8TBE9 248 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 TBC1D15Q8TC07 691 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 DMRTB1Q96MA1 342 aa11.86□□□□□ -0.51
LIG1-208ENST00000595758 C2CD3Q4AC94 2353 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 A0A1W2PQ09 198 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 OR2H2O95918 312 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 FAM157CP0CG43 387 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 GTF2F2P13984 249 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 ZNF44P15621 663 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 HOXB4P17483 251 aaPredicted RBP11.85□□□□□ -0.51
LIG1-208ENST00000595758 SERPINA2P20848 420 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 ARF6P62330 175 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 RPL31P62899 125 aaKnown RBP11.85□□□□□ -0.51
LIG1-208ENST00000595758 IL13RA2Q14627 380 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 C1orf100Q5SVJ3 147 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 Q6P435 159 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 C17orf107Q6ZR85 190 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 GDPD3Q7L5L3 318 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 OR8H2Q8N162 312 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 CHST4Q8NCG5 386 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 OR4M1Q8NGD0 313 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 PPP1R35Q8TAP8 253 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 ONECUT1Q9UBC0 465 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 STUB1Q9UNE7 303 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 ST3GAL6Q9Y274 331 aa11.85□□□□□ -0.51
LIG1-208ENST00000595758 AK6Q9Y3D8 172 aaKnown RBP11.85□□□□□ -0.51
LIG1-208ENST00000595758 TRAV1-2A0A0B4J238 106 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 A0A0G2JK05 382 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 PSPNO60542 156 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 CD37P11049 281 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 LMO1P25800 156 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 PSMD7P51665 324 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 PDCD1Q15116 288 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 GRK1Q15835 563 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 PIGYQ3MUY2 71 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 NHLRC3Q5JS37 347 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 METTL11BQ5VVY1 283 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 C22orf42Q6IC83 251 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 CMTM4Q8IZR5 234 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 FAM185AQ8N0U4 392 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 OR4S1Q8NGB4 309 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 UPRTQ96BW1 309 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 C1orf147Q96MC9 270 aaPredicted RBP11.84□□□□□ -0.51
LIG1-208ENST00000595758 WDFY2Q96P53 400 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 PCGF1Q9BSM1 259 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 CHST6Q9GZX3 395 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 C19orf12Q9NSK7 152 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 GHRLQ9UBU3 117 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 SSR3Q9UNL2 185 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 KPTNQ9Y664 436 aa11.84□□□□□ -0.51
LIG1-208ENST00000595758 ZFHX3Q15911 3703 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 A0A1W2PP11 408 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 TRIM64CA6NLI5 447 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 SLC33A1O00400 549 aaPredicted RBP11.83□□□□□ -0.52
LIG1-208ENST00000595758 PDCD5O14737 125 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 MGST3O14880 152 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 TOX4O94842 621 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 UBBP0CG47 229 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 CD36P16671 472 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 JUNBP17275 347 aaPredicted RBP11.83□□□□□ -0.52
LIG1-208ENST00000595758 MYL9P24844 172 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 HTR2CP28335 458 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 FGF9P31371 208 aaPredicted RBP11.83□□□□□ -0.52
LIG1-208ENST00000595758 OR3A1P47881 315 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 EDDM3BP56851 147 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 RBM11P57052 281 aaKnown RBP11.83□□□□□ -0.52
LIG1-208ENST00000595758 RIPPLY3P57055 190 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 EDDM3AQ14507 147 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 TMEM200BQ69YZ2 307 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 KIR3DL3Q8N743 410 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 OR6M1Q8NGM8 313 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 MRPS24Q96EL2 167 aaKnown RBP11.83□□□□□ -0.52
LIG1-208ENST00000595758 GFI1Q99684 422 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 SIRPDQ9H106 197 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 OR51E2Q9H255 320 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 PLGRKTQ9HBL7 147 aa11.83□□□□□ -0.52
LIG1-208ENST00000595758 TXNL4BQ9NX01 149 aaKnown RBP11.83□□□□□ -0.52
LIG1-208ENST00000595758 MXRA5Q9NR99 2828 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 A0A1W2PPH5 198 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 GEMIN2O14893 280 aaKnown RBP11.82□□□□□ -0.52
LIG1-208ENST00000595758 SLC22A1O15245 554 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 CRTAPO75718 401 aaPredicted RBP11.82□□□□□ -0.52
LIG1-208ENST00000595758 OR7C1O76099 320 aaPredicted RBP11.82□□□□□ -0.52
LIG1-208ENST00000595758 FSHBP01225 129 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 MMP9P14780 707 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 SCGB2A2Q13296 93 aa11.82□□□□□ -0.52
LIG1-208ENST00000595758 PAN3Q58A45 887 aaKnown RBP11.82□□□□□ -0.52
LIG1-208ENST00000595758 KLF17Q5JT82 389 aaPredicted RBP11.82□□□□□ -0.52
LIG1-208ENST00000595758 C1orf122Q6ZSJ8 110 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 89.5 ms