RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 OGG1O15527 345 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 XPNPEP2O43895 674 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 GPR137BO60478 399 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 PSPNO60542 156 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 RBP4P02753 201 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 CALCBP10092 127 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 COX7A1P24310 79 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 OR3A1P47881 315 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 ST3GAL4Q11206 333 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 TAF9Q16594 264 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF782Q6ZMW2 699 aaPredicted RBP12.31□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF485Q8NCK3 441 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 OR52N4Q8NGI2 321 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 TFAP2CQ92754 450 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 TMEM106AQ96A25 262 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF747Q9BV97 191 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 CHST6Q9GZX3 395 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 HEXA-AS1Q9H8Q6 139 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 GLS2Q9UI32 602 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 VPREB3Q9UKI3 123 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 GSTK1Q9Y2Q3 226 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 PCDHGB5Q9Y5G0 923 aa12.31□□□□□ -0.44
TRIM28-205ENST00000595028 MEX3AA1L020 520 aaKnown RBP12.3□□□□□ -0.44
TRIM28-205ENST00000595028 BTBD17A6NE02 478 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 NDUFA7O95182 113 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 OR2H2O95918 312 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 CRYBA1P05813 215 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF728P0DKX0 622 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 MDKP21741 143 aaPredicted RBP12.3□□□□□ -0.44
TRIM28-205ENST00000595028 OMGP23515 440 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 RAG2P55895 527 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 RELBQ01201 579 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 MEF2CQ06413 473 aaPredicted RBP12.3□□□□□ -0.44
TRIM28-205ENST00000595028 SLC34A1Q06495 639 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 DMKNQ6E0U4 476 aaPredicted RBP12.3□□□□□ -0.44
TRIM28-205ENST00000595028 AHSA2Q719I0 299 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 TPRX1Q8N7U7 411 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 BEND2Q8NDZ0 799 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 OR4S1Q8NGB4 309 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 OR13C5Q8NGS8 318 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 OR4F5Q8NH21 305 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 PPP1R35Q8TAP8 253 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF714Q96N38 554 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 PLCXD1Q9NUJ7 323 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 C1RLQ9NZP8 487 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 PSORS1C1Q9UIG5 152 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF281Q9Y2X9 895 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 MMP24Q9Y5R2 645 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 LINC00312Q9Y6C7 94 aa12.3□□□□□ -0.44
TRIM28-205ENST00000595028 KIAA2026Q5HYC2 2103 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 hADV38S2A0JD32 116 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 ERICH4A6NGS2 130 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 GABRPO00591 440 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 MGST3O14880 152 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 TMEM225BP0DP42 221 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 MTNR1BP49286 362 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 BMXP51813 675 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 P2RX3P56373 397 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 GDPGP1Q6ZNW5 385 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 ZFP41Q8N8Y5 198 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 PXT1Q8NFP0 134 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 OR5R1Q8NH85 324 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 TNFAIP8L1Q8WVP5 186 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 C17orf50Q8WW18 174 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 GHSRQ92847 366 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 AJUBAQ96IF1 538 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 PGLYRP3Q96LB9 341 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF696Q9H7X3 374 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 FKBP14Q9NWM8 211 aa12.29□□□□□ -0.44
TRIM28-205ENST00000595028 TRBV5-5A0A0J9YX44 114 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 A0A1B0GUS0 222 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 POM121CA8CG34 1229 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 SH2D1BO14796 132 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 MYL12BO14950 172 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 MAGEB3O15480 346 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 IGHV1-8P0DP01 117 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 ZNF44P15621 663 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 LMO1P25800 156 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 ERP29P30040 261 aaKnown RBP12.28□□□□□ -0.44
TRIM28-205ENST00000595028 C21orf33P30042 268 aaPredicted RBP12.28□□□□□ -0.44
TRIM28-205ENST00000595028 AQP4P55087 323 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 TAS2R43P59537 309 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 PPP3R1P63098 170 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 YIF1BQ5BJH7 314 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 HIST2H2BDQ6DRA6 164 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 ELP2Q6IA86 826 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 SHISA2Q6UWI4 295 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 STX19Q8N4C7 294 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 CHST4Q8NCG5 386 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 BPIFB6Q8NFQ5 453 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 NRG4Q8WWG1 115 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 GPER1Q99527 375 aa12.28□□□□□ -0.44
TRIM28-205ENST00000595028 ODF3BA8MYP8 253 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 H0YJX3 145 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 CLPXO76031 633 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 CSN2P05814 226 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 WNT4P56705 351 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 RPS11P62280 158 aaKnown RBP eCLIP12.27□□□□□ -0.45
TRIM28-205ENST00000595028 Q499Y3 187 aa12.27□□□□□ -0.45
TRIM28-205ENST00000595028 DDI2Q5TDH0 399 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms