RNA–Protein interactions for RNA: ENST00000593829.5

LSM4-203, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM4, Length 1,908 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-203ENST00000593829 TREM2Q9NZC2 230 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 V9GY05 133 aa16.57■□□□□ 0.24
LSM4-203ENST00000593829 PPIHO43447 177 aaKnown RBP16.56■□□□□ 0.24
LSM4-203ENST00000593829 TTRP02766 147 aa16.56■□□□□ 0.24
LSM4-203ENST00000593829 HSD17B13Q7Z5P4 300 aaPredicted RBP16.56■□□□□ 0.24
LSM4-203ENST00000593829 LINC00052Q96N35 136 aa16.56■□□□□ 0.24
LSM4-203ENST00000593829 SEC22CQ9BRL7 303 aa16.56■□□□□ 0.24
LSM4-203ENST00000593829 C12orf4Q9NQ89 552 aa16.56■□□□□ 0.24
LSM4-203ENST00000593829 GPR84Q9NQS5 396 aa16.56■□□□□ 0.24
LSM4-203ENST00000593829 PPP1R3CQ9UQK1 317 aa16.56■□□□□ 0.24
LSM4-203ENST00000593829 IGLV3-1P01715 115 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 FGF2P09038 288 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 ACANP16112 2415 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 NAT1P18440 290 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 ACKR3P25106 362 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 S100A11P31949 105 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 BIVMQ86UB2 503 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 CATSPERDQ86XM0 798 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 SREK1IP1Q8N9Q2 155 aaPredicted RBP16.55■□□□□ 0.24
LSM4-203ENST00000593829 DNAAF1Q8NEP3 725 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 SOX7Q9BT81 388 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 CHIAQ9BZP6 476 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 GCM1Q9NP62 436 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 MED13LQ71F56 2210 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP16.55■□□□□ 0.24
LSM4-203ENST00000593829 ATF4P18848 351 aaPredicted RBP16.55■□□□□ 0.24
LSM4-203ENST00000593829 GNALP38405 381 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 CD200P41217 278 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 SEC61A1P61619 476 aaKnown RBP16.55■□□□□ 0.24
LSM4-203ENST00000593829 HES5Q5TA89 166 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 FAM71F1Q96KD3 344 aaPredicted RBP16.55■□□□□ 0.24
LSM4-203ENST00000593829 OR5V1Q9UGF6 321 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 PFDN2Q9UHV9 154 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 SLC22A13Q9Y226 551 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 RHBDD3Q9Y3P4 386 aa16.55■□□□□ 0.24
LSM4-203ENST00000593829 IGHV4-61A0A0C4DH41 118 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 TSPAN9O75954 239 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 FAUP35544 74 aaKnown RBP16.54■□□□□ 0.24
LSM4-203ENST00000593829 PSMB10P40306 273 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 MZT1Q08AG7 82 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 MPPED2Q15777 294 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 TMEM69Q5SWH9 247 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 SLC36A1Q7Z2H8 476 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 OR6M1Q8NGM8 313 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 DVL3Q92997 716 aaPredicted RBP16.54■□□□□ 0.24
LSM4-203ENST00000593829 TIMD4Q96H15 378 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 PDCD1LG2Q9BQ51 273 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 PAPOLGQ9BWT3 736 aaKnown RBP16.54■□□□□ 0.24
LSM4-203ENST00000593829 ZNF69Q9UC07 566 aa16.54■□□□□ 0.24
LSM4-203ENST00000593829 MTRF1O75570 445 aaKnown RBP16.53■□□□□ 0.24
LSM4-203ENST00000593829 GATA4P43694 442 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 TUSC1Q2TAM9 212 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 SEMA6DQ8NFY4 1073 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 ST8SIA4Q92187 359 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 TMEM106BQ9NUM4 274 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 KLK11Q9UBX7 282 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 IGHV3-64DA0A0J9YX35 117 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 IFNL4K9M1U5 179 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 CST4P01036 141 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 ZNF273Q14593 569 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 PEG10Q86TG7 708 aaKnown RBP16.53■□□□□ 0.24
LSM4-203ENST00000593829 OR8S1Q8NH09 359 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 RAB1CQ92928 201 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 SMR3AQ99954 134 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 SLITRK2Q9H156 845 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 TAS2R8Q9NYW2 309 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 OPN4Q9UHM6 478 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 MPC1Q9Y5U8 109 aa16.53■□□□□ 0.24
LSM4-203ENST00000593829 UBE2QL1A1L167 161 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 P2RY10O00398 339 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 TOR1AO14656 332 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 DHRS3O75911 302 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 CFPP27918 469 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 TAS2R20P59543 309 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 WDR38Q5JTN6 314 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 FDX2Q6P4F2 183 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 TMUB2Q71RG4 321 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 MOGAT3Q86VF5 341 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 PRSS35Q8N3Z0 413 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 PLPP7Q8NBV4 271 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 OR2G2Q8NGZ5 317 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 RGP1Q92546 391 aaPredicted RBP16.52■□□□□ 0.23
LSM4-203ENST00000593829 ERGIC1Q969X5 290 aa16.52■□□□□ 0.23
LSM4-203ENST00000593829 RNF166Q96A37 237 aaPredicted RBP16.52■□□□□ 0.23
LSM4-203ENST00000593829 ZNF816-ZNF321PA0A0X1KG74 233 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 A0A1B0GTI1 187 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 ANXA7P20073 488 aaKnown RBP16.51■□□□□ 0.23
LSM4-203ENST00000593829 RBMS2Q15434 407 aaKnown RBP16.51■□□□□ 0.23
LSM4-203ENST00000593829 ODF4Q2M2E3 257 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 AVPI1Q5T686 147 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 DOK3Q7L591 496 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 BVESQ8NE79 360 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 PIGCQ92535 297 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 PIGLQ9Y2B2 252 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 WIPI2Q9Y4P8 454 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 CR1P17927 2039 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 TRBV5-5A0A0J9YX44 114 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 LOC100289279A0A1B0GTE1 492 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 LRP5LA4QPB2 252 aa16.51■□□□□ 0.23
LSM4-203ENST00000593829 ANXA2P2A6NMY6 339 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms