RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 H3BUI4 141 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 OR2F2O95006 317 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 FAM107AO95990 144 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 SERPINA3P01011 423 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 OR2T7P0C7T2 308 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 HOXD3P31249 432 aaPredicted RBP13.02□□□□□ -0.33
LIG1-205ENST00000593425 BRS3P32247 399 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 ATP1B3P54709 279 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 SPIN3Q5JUX0 258 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 UTF1Q5T230 341 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 CCDC54Q8NEL0 328 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 DNAAF1Q8NEP3 725 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 OR10H4Q8NGA5 316 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 ZNF596Q8TC21 504 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 CAPSLQ8WWF8 208 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 STMN2Q93045 179 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 RNF166Q96A37 237 aaPredicted RBP13.02□□□□□ -0.33
LIG1-205ENST00000593425 C10orf35Q96D05 121 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 RBM14Q96PK6 669 aaKnown RBP13.02□□□□□ -0.33
LIG1-205ENST00000593425 WARS2Q9UGM6 360 aaKnown RBP13.02□□□□□ -0.33
LIG1-205ENST00000593425 HHLA2Q9UM44 414 aa13.02□□□□□ -0.33
LIG1-205ENST00000593425 TRGV10A0A0A0MS01 117 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 IGKV1-12A0A0C4DH73 117 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 LEUTXA8MZ59 168 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 GYG2O15488 501 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 SULT1C4O75897 302 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 OR2H2O95918 312 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 CYB5AP00167 134 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 IGKV1D-12P01611 117 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 HTR1FP30939 366 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 GLIPR1P48060 266 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 ISL1P61371 349 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 DNAL1Q4LDG9 190 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 TP53I3Q53FA7 332 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 DEFB121Q5J5C9 76 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 C9orf152Q5JTZ5 239 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 KDM4DQ6B0I6 523 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 OR52W1Q6IF63 320 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 HEPN1Q6WQI6 88 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 RNF144BQ7Z419 303 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 RTN4RL2Q86UN3 420 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 LINC00482Q8N8I6 264 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 PP6455Q8WZ26 134 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 RFT1Q96AA3 541 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 GAL3ST2Q9H3Q3 398 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 HMG20AQ9NP66 347 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 EXOSC4Q9NPD3 245 aaKnown RBP13.01□□□□□ -0.33
LIG1-205ENST00000593425 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.01□□□□□ -0.33
LIG1-205ENST00000593425 GSTK1Q9Y2Q3 226 aa13.01□□□□□ -0.33
LIG1-205ENST00000593425 DUS4LO95620 317 aaKnown RBP13□□□□□ -0.33
LIG1-205ENST00000593425 UBCP0CG48 685 aaKnown RBP13□□□□□ -0.33
LIG1-205ENST00000593425 ATF1P18846 271 aa13□□□□□ -0.33
LIG1-205ENST00000593425 CD34P28906 385 aa13□□□□□ -0.33
LIG1-205ENST00000593425 MTCP1P56278 107 aa13□□□□□ -0.33
LIG1-205ENST00000593425 CDC42P60953 191 aa13□□□□□ -0.33
LIG1-205ENST00000593425 ZNF85Q03923 595 aa13□□□□□ -0.33
LIG1-205ENST00000593425 AESQ08117 197 aa13□□□□□ -0.33
LIG1-205ENST00000593425 EGFEM1PQ0D2K5 195 aa13□□□□□ -0.33
LIG1-205ENST00000593425 HLA-DRB5Q30154 266 aa13□□□□□ -0.33
LIG1-205ENST00000593425 TPTE2P1Q5T6R2 138 aa13□□□□□ -0.33
LIG1-205ENST00000593425 ETV3LQ6ZN32 361 aa13□□□□□ -0.33
LIG1-205ENST00000593425 CORO2AQ92828 525 aa13□□□□□ -0.33
LIG1-205ENST00000593425 SLC7A6OSQ96CW6 309 aaPredicted RBP13□□□□□ -0.33
LIG1-205ENST00000593425 GABARAPL1Q9H0R8 117 aa13□□□□□ -0.33
LIG1-205ENST00000593425 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13□□□□□ -0.33
LIG1-205ENST00000593425 TAS2R3Q9NYW6 316 aa13□□□□□ -0.33
LIG1-205ENST00000593425 GLS2Q9UI32 602 aa13□□□□□ -0.33
LIG1-205ENST00000593425 GNG8Q9UK08 70 aa13□□□□□ -0.33
LIG1-205ENST00000593425 KIAA2026Q5HYC2 2103 aa13□□□□□ -0.33
LIG1-205ENST00000593425 G3V2T6 193 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 LY6LH3BQJ8 138 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 BUB1B-PAK6H3BSN5 160 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 POLR2IP36954 125 aaKnown RBP12.99□□□□□ -0.33
LIG1-205ENST00000593425 PDZK1IP1Q13113 114 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 ATP6AP1Q15904 470 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 LHFPL2Q6ZUX7 228 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 OR5D18Q8NGL1 313 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 COQ2Q96H96 371 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 OPALINQ96PE5 141 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 SPACA5Q96QH8 159 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 COMMD4Q9H0A8 199 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 ING3Q9NXR8 418 aa12.99□□□□□ -0.33
LIG1-205ENST00000593425 ODAMA1E959 279 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 SH2D1BO14796 132 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 KDM4BO94953 1096 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 CLIC3O95833 236 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 VSIG8P0DPA2 414 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 PRKACBP22694 351 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 LMO1P25800 156 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 PTGFRP43088 359 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 OR3A4PP47883 348 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 ARHGDIBP52566 201 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 KPNB1Q14974 876 aaKnown RBP12.98□□□□□ -0.33
LIG1-205ENST00000593425 C17orf58Q2M2W7 97 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 UTS2BQ765I0 119 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 FAM220AQ7Z4H9 259 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 MRPL41Q8IXM3 137 aaKnown RBP12.98□□□□□ -0.33
LIG1-205ENST00000593425 OSR2Q8N2R0 312 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 OR2G2Q8NGZ5 317 aa12.98□□□□□ -0.33
LIG1-205ENST00000593425 EME1Q96AY2 570 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms