RNA–Protein interactions for RNA: ENST00000593099.5

LIG3-216, Transcript of DNA ligase 3, humanhuman

TSL 2

Gene LIG3, Length 4,664 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-216ENST00000593099 ATP5J2P56134 94 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 SIAH3Q8IW03 269 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 OR52I2Q8NH67 350 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 CHST5Q9GZS9 411 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 OR6C3Q9NZP0 311 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 PPIAL4AQ9Y536 164 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 GOLGB1Q14789 3259 aaKnown RBP8.55□□□□□ -1.04
LIG3-216ENST00000593099 HSD17B6O14756 317 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 TIMP3P35625 211 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 MDH2P40926 338 aaKnown RBP8.55□□□□□ -1.04
LIG3-216ENST00000593099 NPY4RP50391 375 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 NAAAQ02083 359 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 ROM1Q03395 351 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 SNTB1Q13884 538 aaKnown RBP8.55□□□□□ -1.04
LIG3-216ENST00000593099 PDCD1Q15116 288 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 RTL8BQ17RB0 113 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 PHLDA2Q53GA4 152 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 RPUSD3Q6P087 351 aaKnown RBP8.55□□□□□ -1.04
LIG3-216ENST00000593099 LINC00114Q6XXX2 140 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 LILRB2Q8N423 598 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 CLRN3Q8NCR9 226 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 ST6GALNAC3Q8NDV1 305 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 OR56B4Q8NH76 319 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 UPRTQ96BW1 309 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 WNT5BQ9H1J7 359 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 CLN8Q9UBY8 286 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 KLHDC2Q9Y2U9 406 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 A0A0G2JMP0 313 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 J3QW42 95 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 IFNL4K9M1U5 179 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 GOSR2O14653 212 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 SYNGR3O43761 229 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 PRF1P14222 555 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 OR3A4PP47883 348 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 CRYBA2P53672 197 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 DLX5P56178 289 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 GK2Q14410 553 aaPredicted RBP8.55□□□□□ -1.04
LIG3-216ENST00000593099 MUC20Q8N307 709 aaPredicted RBP8.55□□□□□ -1.04
LIG3-216ENST00000593099 OR4M2Q8NGB6 313 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 TOLLIPQ9H0E2 274 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 ZNF665Q9H7R5 613 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 RNF122Q9H9V4 155 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 ZDHHC8Q9ULC8 765 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 CSAG2Q9Y5P2 127 aa8.55□□□□□ -1.04
LIG3-216ENST00000593099 B9A039 149 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 PHF1O43189 567 aaPredicted RBP8.54□□□□□ -1.04
LIG3-216ENST00000593099 TTRP02766 147 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 CLPSP04118 112 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 OR5H8P0DN80 308 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 TBPP20226 339 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 GNLYP22749 145 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 Q6ZNX1 250 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 NAA40Q86UY6 237 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 MUC15Q8N387 334 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 OR51H1Q8NH63 302 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ADAMTS17Q8TE56 1095 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 MBD3L1Q8WWY6 194 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 SEH1LQ96EE3 360 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 TPPP3Q9BW30 176 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 BARX1Q9HBU1 254 aaPredicted RBP8.54□□□□□ -1.04
LIG3-216ENST00000593099 KIF26AQ9ULI4 1882 aaPredicted RBP8.54□□□□□ -1.04
LIG3-216ENST00000593099 MED12Q93074 2177 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 MYO7BQ6PIF6 2116 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ZG16O60844 167 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ADAM11O75078 769 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 IL18BPO95998 194 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 GLRXP35754 106 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 NRN1LQ496H8 165 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 PRR27Q6MZM9 219 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 IGFL3Q6UXB1 125 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 S100A7AQ86SG5 101 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 WFIKKN1Q96NZ8 548 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 DLL4Q9NR61 685 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 SPTBN1Q01082 2364 aaKnown RBP8.54□□□□□ -1.04
LIG3-216ENST00000593099 F5H5P2 479 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ZNF205O95201 554 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ACSM1Q08AH1 577 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 PRAMEF6Q5VXH4 476 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 LINC00299Q6ZSB3 139 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 RBMXL3Q8N7X1 1067 aaKnown RBP8.54□□□□□ -1.04
LIG3-216ENST00000593099 OR2T35Q8NGX2 323 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 MITD1Q8WV92 249 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ZNF2Q9BSG1 426 aaPredicted RBP8.54□□□□□ -1.04
LIG3-216ENST00000593099 CNTD2Q9H8S5 307 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 IL19Q9UHD0 177 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 V9GYS6 101 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ROS1P08922 2347 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 A0A087X0M5 115 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 A0A1B0GX30 115 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 XRCC3O43542 346 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 NPIPB7O75200 414 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 CD40P25942 277 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 KCNJ3P48549 501 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 SCAND1P57086 179 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 SSX1Q16384 188 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 FAM209AQ5JX71 171 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 ETV3LQ6ZN32 361 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 C17orf107Q6ZR85 190 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 C19orf35Q6ZS72 473 aa8.54□□□□□ -1.04
LIG3-216ENST00000593099 GLYATL2Q8WU03 294 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms