RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 JAGN1Q8N5M9 183 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 MS4A15Q8N5U1 240 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 ZDHHC22Q8N966 263 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 OR52N4Q8NGI2 321 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 OR51A2Q8NGJ7 313 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 FAM216AQ8WUB2 273 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 ORAI1Q96D31 301 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 OR14A2Q96R54 314 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 CDCA4Q9BXL8 241 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 CHST6Q9GZX3 395 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 ZMAT3Q9HA38 289 aaKnown RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 SEBOXQ9HB31 216 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 PAK1IP1Q9NWT1 392 aaPredicted RBP8.28□□□□□ -1.08
BRCA1-227ENST00000591849 ING3Q9NXR8 418 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 IL36RNQ9UBH0 155 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 RAB26Q9ULW5 256 aa8.28□□□□□ -1.08
BRCA1-227ENST00000591849 DOCK11Q5JSL3 2073 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 TRBV5-5A0A0J9YX44 114 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 MDFIC2A0A1B0GVS7 189 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 TMEM82A0PJX8 343 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 MEX3AA1L020 520 aaKnown RBP8.27□□□□□ -1.09
BRCA1-227ENST00000591849 MEIOCA2RUB1 952 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 BTBD17A6NE02 478 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 DNAJC9-AS1A6NH13 148 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 GABRPO00591 440 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 MGST3O14880 152 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 NPFFO15130 113 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 OR2H2O95918 312 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 MAS1P04201 325 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 PTGFRP43088 359 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 MTNR1BP49286 362 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 UBE2E1P51965 193 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 ERVFRD-1P60508 538 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 ZP1P60852 638 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 KLRD1Q13241 179 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF146Q15072 292 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 RBM48Q5RL73 367 aaKnown RBP8.27□□□□□ -1.09
BRCA1-227ENST00000591849 Q8N7P7 452 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 CHST4Q8NCG5 386 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF485Q8NCK3 441 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 PXT1Q8NFP0 134 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 OR10K1Q8NGX5 313 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 RPS4Y2Q8TD47 263 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 UFD1Q92890 307 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 PGLYRP3Q96LB9 341 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF48Q96MX3 618 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-227ENST00000591849 OR5M11Q96RB7 305 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF184Q99676 751 aaPredicted RBP8.27□□□□□ -1.09
BRCA1-227ENST00000591849 TMED9Q9BVK6 235 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 TCF7L1Q9HCS4 588 aa8.27□□□□□ -1.09
BRCA1-227ENST00000591849 TRGV10A0A0A0MS01 117 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 A0A0U1RQK1 487 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 MEGF11A6BM72 1044 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 HAX1O00165 279 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 HOXA3O43365 443 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF737O75373 536 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 CDRT1O95170 752 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 CD1AP06126 327 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 FBP1P09467 338 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF728P0DKX0 622 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 CCL3L1P16619 93 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 COX7A1P24310 79 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 CRHBPP24387 322 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 OR3A4PP47883 348 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 DLX1P56177 255 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 SLC35A2P78381 396 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 MEF2CQ06413 473 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-227ENST00000591849 GPR176Q14439 515 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF273Q14593 569 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 SLC9A3R2Q15599 337 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 ACSM3Q53FZ2 586 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF529Q6P280 563 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 METAP1DQ6UB28 335 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-227ENST00000591849 Q6YL49 198 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 TPRX1Q8N7U7 411 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 OR4S1Q8NGB4 309 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 OR13D1Q8NGV5 346 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 NKX3-1Q99801 234 aaPredicted RBP8.26□□□□□ -1.09
BRCA1-227ENST00000591849 SLITRK2Q9H156 845 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 DPAGT1Q9H3H5 408 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 ESM1Q9NQ30 184 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 FOXJ3Q9UPW0 622 aa8.26□□□□□ -1.09
BRCA1-227ENST00000591849 MRPS28Q9Y2Q9 187 aaKnown RBP8.26□□□□□ -1.09
BRCA1-227ENST00000591849 RRP15Q9Y3B9 282 aaKnown RBP8.26□□□□□ -1.09
BRCA1-227ENST00000591849 TRBV5-7A0A0A0MS05 114 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 A0A0G2JK05 382 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 RNASEK-C17orf49H0YIS7 233 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 HSPB6O14558 160 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 PSPNO60542 156 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 ZNF780AO75290 641 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-227ENST00000591849 GPX5O75715 221 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 IGFBP3P17936 291 aaPredicted RBP8.25□□□□□ -1.09
BRCA1-227ENST00000591849 SERPINA2P20848 420 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 P2RX3P56373 397 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 RPS11P62280 158 aaKnown RBP eCLIP8.25□□□□□ -1.09
BRCA1-227ENST00000591849 AESQ08117 197 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 ACSM1Q08AH1 577 aa8.25□□□□□ -1.09
BRCA1-227ENST00000591849 DYNC1I2Q13409 638 aaKnown RBP8.25□□□□□ -1.09
BRCA1-227ENST00000591849 GPR50Q13585 617 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms