RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 A0A0U1RQK1 487 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 hCG_1809904A0A1W2PP81 198 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 A0A1W2PPE2 198 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 A0A1W2PR64 198 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 A0A1W2PRD5 423 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 A0A1W2PRF3 423 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 A0A1W2PRM7 423 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 A0A1W2PRV1 198 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 GABRPO00591 440 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 NPFFO15130 113 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 OR2H2O95918 312 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 CD1AP06126 327 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 RNASE1P07998 156 aaKnown RBP7.52□□□□□ -1.21
DNMT1-223ENST00000591239 CCL3L1P16619 93 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 IGFBP3P17936 291 aaPredicted RBP7.52□□□□□ -1.21
DNMT1-223ENST00000591239 EEF1B2P24534 225 aaKnown RBP7.52□□□□□ -1.21
DNMT1-223ENST00000591239 PTGFRP43088 359 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 SLC35A2P78381 396 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 BDH1Q02338 343 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 DOC2BQ14184 412 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 EDDM3AQ14507 147 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF273Q14593 569 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 GRK1Q15835 563 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 DDI2Q5TDH0 399 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 C11orf42Q8N5U0 333 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 PXT1Q8NFP0 134 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 TNFAIP8L1Q8WVP5 186 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 GCDHQ92947 438 aaPredicted RBP7.52□□□□□ -1.21
DNMT1-223ENST00000591239 NKX3-1Q99801 234 aaPredicted RBP7.52□□□□□ -1.21
DNMT1-223ENST00000591239 CHST6Q9GZX3 395 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 EXOSC4Q9NPD3 245 aaKnown RBP7.52□□□□□ -1.21
DNMT1-223ENST00000591239 CKLFQ9UBR5 152 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 SF3B6Q9Y3B4 125 aaKnown RBP7.52□□□□□ -1.21
DNMT1-223ENST00000591239 TPRKBQ9Y3C4 175 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 FAM96BQ9Y3D0 163 aa7.52□□□□□ -1.21
DNMT1-223ENST00000591239 TRAV8-7A0A075B6U6 113 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 TRBV5-7A0A0A0MS05 114 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 A0A0G2JK05 382 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 A0A1W2PPK0 400 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 MEX3AA1L020 520 aaKnown RBP7.51□□□□□ -1.21
DNMT1-223ENST00000591239 MEIOCA2RUB1 952 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 TMEM89A2RUT3 159 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 SIRPB1O00241 398 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 MGST3O14880 152 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 GPX5O75715 221 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 MELTFP08582 738 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF728P0DKX0 622 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 FSTP19883 344 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 LMO1P25800 156 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 BDKRB2P30411 391 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 SAA4P35542 130 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF93P35789 620 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-223ENST00000591239 TGFBR2P37173 567 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 OR3A1P47881 315 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 OR3A4PP47883 348 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 MTNR1BP49286 362 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 COMPP49747 757 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-223ENST00000591239 BMXP51813 675 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 DLX6P56179 175 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 ERVFRD-1P60508 538 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 MEF2CQ06413 473 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-223ENST00000591239 SCN1BQ07699 218 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 ACSM1Q08AH1 577 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 RSU1Q15404 277 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 SPHARQ15513 63 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 ELP2Q6IA86 826 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 HCP5Q6MZN7 132 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 Q6P435 159 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 C16orf87Q6PH81 154 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 PNKDQ8N490 385 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 TPRX1Q8N7U7 411 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 OR4S1Q8NGB4 309 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 OR10K1Q8NGX5 313 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 PPP1R35Q8TAP8 253 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 SSMEM1Q8WWF3 244 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 CNBD2Q96M20 576 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 DERL3Q96Q80 235 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 OR14A2Q96R54 314 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 OR5M11Q96RB7 305 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 NR1H4Q96RI1 486 aaPredicted RBP7.51□□□□□ -1.21
DNMT1-223ENST00000591239 FAM192AQ9GZU8 254 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 DUSP21Q9H596 190 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 HEXA-AS1Q9H8Q6 139 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 TNFRSF19Q9NS68 423 aa7.51□□□□□ -1.21
DNMT1-223ENST00000591239 LSM2Q9Y333 95 aaKnown RBP7.51□□□□□ -1.21
DNMT1-223ENST00000591239 hADV38S2A0JD32 116 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 MAGEA13PA6NCF6 341 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 C17orf98A8MV24 154 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 SLC33A1O00400 549 aaPredicted RBP7.5□□□□□ -1.21
DNMT1-223ENST00000591239 DEGS1O15121 323 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 RGS10O43665 173 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 CDRT1O95170 752 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 RBP4P02753 201 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 FBP1P09467 338 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 HKR1P10072 659 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 ZNF44P15621 663 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 CRHBPP24387 322 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 ERP29P30040 261 aaKnown RBP7.5□□□□□ -1.21
DNMT1-223ENST00000591239 VHLP40337 213 aa7.5□□□□□ -1.21
DNMT1-223ENST00000591239 IER3P46695 156 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms