RNA–Protein interactions for RNA: ENST00000590917.5

SEPT9-233, Transcript of septin 9, human

TSL 4 BASIC

Gene SEPT9, Length 541 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEPT9-233	ENST00000590917	PROK1	P58294	105 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	SCN1B	Q07699	218 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	MED21	Q13503	144 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	LRRC36	Q1X8D7	754 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	PLA1A	Q53H76	456 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	TTC23	Q5W5X9	447 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	LIAT1	Q6ZQX7	453 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	LHFPL4	Q7Z7J7	247 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	SETD9	Q8NE22	299 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	OR4S1	Q8NGB4	309 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	OR52N4	Q8NGI2	321 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	GPER1	Q99527	375 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	FGF20	Q9NP95	211 aa	Predicted RBP	11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	C8orf4	Q9NR00	106 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	SESN1	Q9Y6P5	492 aa		11.96	□□□□□ -0.49
SEPT9-233	ENST00000590917	TRGV10	A0A0A0MS01	117 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	IGKV1-12	A0A0C4DH73	117 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	ALX3	O95076	343 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	OR2H2	O95918	312 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	IGKV1D-12	P01611	117 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	CD2	P06729	351 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	RAB3A	P20336	220 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	DCK	P27707	260 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	ERP29	P30040	261 aa	Known RBP	11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	OR3A1	P47881	315 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	P2RX3	P56373	397 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	KISS1	Q15726	138 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	FAM189A2	Q15884	450 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	SMN1	Q16637	294 aa	Known RBP	11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	ZNF691	Q5VV52	312 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	SLC35E4	Q6ICL7	350 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	RPL22L1	Q6P5R6	122 aa	Known RBP	11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	SATL1	Q86VE3	508 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	PARP16	Q8N5Y8	322 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	DTX3	Q8N9I9	347 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	OR11H6	Q8NGC7	330 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	CNIH3	Q8TBE1	160 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	MALSU1	Q96EH3	234 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	AJUBA	Q96IF1	538 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	ZNF649	Q9BS31	505 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	JAM3	Q9BX67	310 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	GAL3ST2	Q9H3Q3	398 aa		11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	CHCHD3	Q9NX63	227 aa	Known RBP	11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.95	□□□□□ -0.5
SEPT9-233	ENST00000590917	FAM90A8P	A6NJQ4	464 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	ODF3B	A8MYP8	253 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	DEGS1	O15121	323 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	WBP4	O75554	376 aa	Known RBP	11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	CLIC3	O95833	236 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	LIMS3	P0CW19	117 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	LIMS4	P0CW20	117 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	SOX2	P48431	317 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	GTF2A1	P52655	376 aa	Predicted RBP	11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	KRTAP10-3	P60369	221 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	SSX2	Q16385	188 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	CCDC58	Q4VC31	144 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	ZNF626	Q68DY1	528 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	TCF23	Q7RTU1	214 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	PACRGL	Q8N7B6	248 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	CHST4	Q8NCG5	386 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	OR2T6	Q8NHC8	308 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	NDNF	Q8TB73	568 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	RPS4Y2	Q8TD47	263 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	GPR148	Q8TDV2	347 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	NKX3-1	Q99801	234 aa	Predicted RBP	11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	NPFFR1	Q9GZQ6	430 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	FAM192A	Q9GZU8	254 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	FBLN5	Q9UBX5	448 aa		11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	EXOSC1	Q9Y3B2	195 aa	Known RBP	11.94	□□□□□ -0.5
SEPT9-233	ENST00000590917	MGAM2	Q2M2H8	2515 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917		H3BUI4	141 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	RRP9	O43818	475 aa	Known RBP	11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	MTNR1B	P49286	362 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	ETV1	P50549	477 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	AES	Q08117	197 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	IL18R1	Q13478	541 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	CDK5R1	Q15078	307 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	RCN1	Q15293	331 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	ASPHD2	Q6ICH7	369 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	OR52W1	Q6IF63	320 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	C11orf88	Q6PI97	169 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	RNF144B	Q7Z419	303 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	DHRSX	Q8N5I4	330 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	TNFAIP8L1	Q8WVP5	186 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	NR1H4	Q96RI1	486 aa	Predicted RBP	11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	CLEC7A	Q9BXN2	247 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	TMEM133	Q9H2Q1	129 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	RANBP3	Q9H6Z4	567 aa	Predicted RBP	11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	ING3	Q9NXR8	418 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	TAS2R4	Q9NYW5	299 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	PITPNC1	Q9UKF7	332 aa		11.93	□□□□□ -0.5
SEPT9-233	ENST00000590917	IGHV2-26	A0A0B4J1V2	119 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917		A0A0G2JK05	382 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917	VGLL3	A8MV65	326 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917	F2RL2	O00254	374 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917	LMO1	P25800	156 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917	KIR2DS4	P43632	304 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917	ZP1	P60852	638 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917	PPP3R1	P63098	170 aa		11.92	□□□□□ -0.5
SEPT9-233	ENST00000590917	SLC34A1	Q06495	639 aa		11.92	□□□□□ -0.5

Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms