RNA–Protein interactions for RNA: ENST00000590630.5

LIG3-213, Transcript of DNA ligase 3, humanhuman

TSL 5

Gene LIG3, Length 904 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-213ENST00000590630 EXOSC4Q9NPD3 245 aaKnown RBP9.79□□□□□ -0.84
LIG3-213ENST00000590630 NOX4Q9NPH5 578 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 C19orf12Q9NSK7 152 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 IL36GQ9NZH8 169 aa9.79□□□□□ -0.84
LIG3-213ENST00000590630 IGHV3OR16-10A0A075B7F0 116 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 CENPVL3A0A0U1RRI6 287 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 hCG_1809904A0A1W2PP81 198 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 A0A1W2PPE2 198 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 A0A1W2PR64 198 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 A0A1W2PRV1 198 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 TMEM82A0PJX8 343 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 MEGF11A6BM72 1044 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 MAGEA13PA6NCF6 341 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 PIN1P1O15428 100 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 PSPNO60542 156 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 ZNF780AO75290 641 aaPredicted RBP9.78□□□□□ -0.84
LIG3-213ENST00000590630 SC5DO75845 299 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 OR2H2O95918 312 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 CALCBP10092 127 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 CPEP16870 476 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 GABRR1P24046 479 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 LMO1P25800 156 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 MAP2K4P45985 399 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 SNU13P55769 128 aaKnown RBP9.78□□□□□ -0.84
LIG3-213ENST00000590630 GUCA2AQ02747 115 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 GRK1Q15835 563 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 NCR3LG1Q68D85 454 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 UNQ9370/PRO34162Q6UXP9 181 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 RBMS3Q6XE24 437 aaKnown RBP9.78□□□□□ -0.84
LIG3-213ENST00000590630 Q8N7P7 452 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 OR51T1Q8NGJ9 327 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 LHX4Q969G2 390 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 MGLLQ99685 303 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 METTL9Q9H1A3 318 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 ACOT13Q9NPJ3 140 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 PCDHB16Q9NRJ7 776 aa9.78□□□□□ -0.84
LIG3-213ENST00000590630 STAB1Q9NY15 2570 aa9.77□□□□□ -0.84
LIG3-213ENST00000590630 IGHV1-69DA0A0B4J2H0 117 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 MGST3O14880 152 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 CDRT1O95170 752 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 IGHV1-69P01742 117 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 CSTBP04080 98 aaKnown RBP9.77□□□□□ -0.85
LIG3-213ENST00000590630 MAS1P04201 325 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 ZNF44P15621 663 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 EDDM3BP56851 147 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 EMX1Q04741 257 aaPredicted RBP9.77□□□□□ -0.85
LIG3-213ENST00000590630 MEF2CQ06413 473 aaPredicted RBP9.77□□□□□ -0.85
LIG3-213ENST00000590630 GPR176Q14439 515 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 INSL4Q14641 139 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 NHLRC3Q5JS37 347 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 TMEM200BQ69YZ2 307 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 BRD3OSQ6XYD6 125 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 CEACAM19Q7Z692 300 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 PHC2Q8IXK0 858 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 BCL6BQ8N143 479 aaPredicted RBP9.77□□□□□ -0.85
LIG3-213ENST00000590630 SVOPQ8N4V2 548 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 JAGN1Q8N5M9 183 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 OR4M1Q8NGD0 313 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 ZFAND2BQ8WV99 257 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 PHYHIPQ92561 330 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 UQCC2Q9BRT2 126 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 CHST6Q9GZX3 395 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 TCF7L1Q9HCS4 588 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 SIRT7Q9NRC8 400 aa9.77□□□□□ -0.85
LIG3-213ENST00000590630 A0A0G2JK05 382 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 hADV38S2A0JD32 116 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 FUOMA2VDF0 154 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 SIRPB1O00241 398 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 DEGS1O15121 323 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 RGS9O75916 674 aaPredicted RBP9.76□□□□□ -0.85
LIG3-213ENST00000590630 VENTXO95231 258 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 HTR3BO95264 441 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 RBP4P02753 201 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 CSN2P05814 226 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 UCHL1P09936 223 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 PRTN3P24158 256 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 ERP29P30040 261 aaKnown RBP9.76□□□□□ -0.85
LIG3-213ENST00000590630 GABRA5P31644 462 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 OR3A1P47881 315 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 SCN1BQ07699 218 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 EDDM3AQ14507 147 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 IL13RA2Q14627 380 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 HSD17B12Q53GQ0 312 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 FAM27D1Q5T7N8 215 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 Q6P435 159 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 LINC00596Q86U02 117 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 LYPD6Q86Y78 171 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 OSR2Q8N2R0 312 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 SIGLECL1Q8N7X8 197 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 OR4S1Q8NGB4 309 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 OR10K1Q8NGX5 313 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 FCGR1BQ92637 280 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 TMEM203Q969S6 136 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 NR1H4Q96RI1 486 aaPredicted RBP9.76□□□□□ -0.85
LIG3-213ENST00000590630 NKX3-1Q99801 234 aaPredicted RBP9.76□□□□□ -0.85
LIG3-213ENST00000590630 ING4Q9UNL4 249 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 MRPS28Q9Y2Q9 187 aaKnown RBP9.76□□□□□ -0.85
LIG3-213ENST00000590630 LRRC42Q9Y546 428 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 LINC00312Q9Y6C7 94 aa9.76□□□□□ -0.85
LIG3-213ENST00000590630 RNF212BA8MTL3 300 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms