RNA–Protein interactions for RNA: ENST00000590627.5

GCDH-213, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 1 (best)

Gene GCDH, Length 1,051 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-213ENST00000590627 FAM90A15PP0C7V4 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A13PP0C7W8 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A14PP0C7W9 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 FAM90A24PP0C7X0 464 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 MUC1P15941 1255 aaPredicted RBP13.87□□□□□ -0.19
GCDH-213ENST00000590627 ZNF16P17020 682 aaPredicted RBP13.87□□□□□ -0.19
GCDH-213ENST00000590627 PRKACAP17612 351 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 TMEM33P57088 247 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 SPIN3Q5JUX0 258 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 LINC00596Q86U02 117 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 RAB40AQ8WXH6 277 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 SELENOIQ9C0D9 397 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 MIXL1Q9H2W2 232 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 ST3GAL6Q9Y274 331 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 PEX16Q9Y5Y5 336 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 TANC2Q9HCD6 1990 aa13.87□□□□□ -0.19
GCDH-213ENST00000590627 METTL21EPA6NDL7 271 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 OOEPA6NGQ2 149 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 LYNX1G3V0Z9 82 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 LGALS8O00214 317 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 LY6HO94772 140 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 CHRM2P08172 466 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 LYNX1P0DP58 116 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 CPT2P23786 658 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 MPV17LQ2QL34 196 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 FIP1L1Q6UN15 594 aaKnown RBP13.86□□□□□ -0.19
GCDH-213ENST00000590627 LRRC28Q86X40 367 aaPredicted RBP13.86□□□□□ -0.19
GCDH-213ENST00000590627 CMTM4Q8IZR5 234 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 BATF2Q8N1L9 274 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 OR6Q1Q8NGQ2 317 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 WDFY2Q96P53 400 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 NUDT16L1Q9BRJ7 211 aaKnown RBP13.86□□□□□ -0.19
GCDH-213ENST00000590627 PIMREGQ9BSJ6 248 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 IFT22Q9H7X7 185 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 NLKQ9UBE8 527 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 ADAM30Q9UKF2 790 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 KCNS2Q9ULS6 477 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 ANK2Q01484 3957 aa13.86□□□□□ -0.19
GCDH-213ENST00000590627 PPIAL4EA0A075B759 164 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 A0A0A6YYH2 397 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 TRAV38-1A0A0B4J264 116 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 A6NJ64 397 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 CLDN25C9JDP6 229 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 PPIAL4DF5H284 164 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 C3orf80F5H4A9 247 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 H3BUI4 141 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 RGS5O15539 181 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 SCGNO76038 276 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 EIF4EP06730 217 aaKnown RBP13.85□□□□□ -0.19
GCDH-213ENST00000590627 PPIAL4FP0DN26 164 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 ELK1P19419 428 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 CD80P33681 288 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 RBMXP38159 391 aaKnown RBP13.85□□□□□ -0.19
GCDH-213ENST00000590627 NR4A2P43354 598 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 HOXA4Q00056 320 aaPredicted RBP13.85□□□□□ -0.19
GCDH-213ENST00000590627 MICBQ29980 383 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 PIGYQ3MUY2 71 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 FAM201AQ5SY85 155 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 RAB12Q6IQ22 244 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 LAX1Q8IWV1 398 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 BOLLQ8N9W6 283 aaKnown RBP13.85□□□□□ -0.19
GCDH-213ENST00000590627 SEH1LQ96EE3 360 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 GAL3ST1Q99999 423 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 IL36RNQ9UBH0 155 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 DNAJB11Q9UBS4 358 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 WIPI2Q9Y4P8 454 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 PPIAL4AQ9Y536 164 aa13.85□□□□□ -0.19
GCDH-213ENST00000590627 NBEAL1Q6ZS30 2694 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 A0A0A6YYD4 124 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 FOXI3A8MTJ6 420 aaPredicted RBP13.84□□□□□ -0.19
GCDH-213ENST00000590627 RAB27BO00194 218 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 GEMIN2O14893 280 aaKnown RBP13.84□□□□□ -0.19
GCDH-213ENST00000590627 PSG2P11465 335 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 SRD5A1P18405 259 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 GIFP27352 417 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 S100A5P33763 92 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 GMFBP60983 142 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 BTG1P62324 171 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 TAF9Q16594 264 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 KRTAP24-1Q3LI83 254 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 ATPAF1Q5TC12 328 aaPredicted RBP13.84□□□□□ -0.19
GCDH-213ENST00000590627 STUMQ69YW2 141 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 Q6P435 159 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 PEG10Q86TG7 708 aaKnown RBP13.84□□□□□ -0.19
GCDH-213ENST00000590627 OR56B1Q8NGI3 324 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 ANGPTL6Q8NI99 470 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 S100A16Q96FQ6 103 aaKnown RBP13.84□□□□□ -0.19
GCDH-213ENST00000590627 NICN1Q9BSH3 213 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 ATG5Q9H1Y0 275 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 TMEM165Q9HC07 324 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 GLS2Q9UI32 602 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 ZNF222Q9UK12 451 aa13.84□□□□□ -0.19
GCDH-213ENST00000590627 IGKV1D-17A0A075B6S4 117 aa13.83□□□□□ -0.2
GCDH-213ENST00000590627 RFPL4AA6NLU0 287 aa13.83□□□□□ -0.2
GCDH-213ENST00000590627 OR2AT4A6NND4 320 aa13.83□□□□□ -0.2
GCDH-213ENST00000590627 RFPL4AL1F8VTS6 287 aa13.83□□□□□ -0.2
GCDH-213ENST00000590627 SH2D1BO14796 132 aa13.83□□□□□ -0.2
GCDH-213ENST00000590627 TNFRSF13BO14836 293 aaPredicted RBP13.83□□□□□ -0.2
GCDH-213ENST00000590627 TPPPO94811 219 aa13.83□□□□□ -0.2
GCDH-213ENST00000590627 IGHV2-70P01814 119 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms