RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 FPR2P25090 351 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ACKR3P25106 362 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 PPP1CBP62140 327 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 IGSF11Q5DX21 431 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF529Q6P280 563 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 LYZL2Q7Z4W2 148 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 RTN4RL2Q86UN3 420 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ZDHHC22Q8N966 263 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 MRPL24Q96A35 216 aaKnown RBP12.69□□□□□ -0.38
RETREG3-208ENST00000589797 KIF25Q9UIL4 384 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 FAM96BQ9Y3D0 163 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 SZT2Q5T011 3432 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 ERVH48-1M5A8F1 160 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 GP1BAP07359 652 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 OR10S1Q8NGN2 331 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 RPS4Y2Q8TD47 263 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 FGF11Q92914 225 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 PBDC1Q9BVG4 233 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 SLC25A32Q9H2D1 315 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 FIGNL2A6NMB9 653 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 CD1AP06126 327 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 AADACP22760 399 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 RPL7L1Q6DKI1 246 aaKnown RBP12.68□□□□□ -0.38
RETREG3-208ENST00000589797 FDCSPQ8NFU4 85 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 MED30Q96HR3 178 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 SLC25A31Q9H0C2 315 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF391Q9UJN7 358 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 URGCP-MRPS24S4R325 110 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 COL4A3Q01955 1670 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 ZFP92A6NM28 416 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 ENDOGQ14249 297 aaKnown RBP12.68□□□□□ -0.38
RETREG3-208ENST00000589797 HAGHQ16775 308 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 LCN15Q6UWW0 184 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF826PQ6ZT77 177 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 PLK3Q9H4B4 646 aa12.68□□□□□ -0.38
RETREG3-208ENST00000589797 LINC01387J3KSC0 135 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 HMGB3O15347 200 aaKnown RBP12.67□□□□□ -0.38
RETREG3-208ENST00000589797 TMEM127O75204 238 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 ISG15P05161 165 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 BTCP35070 178 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 POLR2GP62487 172 aaKnown RBP eCLIP12.67□□□□□ -0.38
RETREG3-208ENST00000589797 CISD2Q8N5K1 135 aaKnown RBP12.67□□□□□ -0.38
RETREG3-208ENST00000589797 SCCPDHQ8NBX0 429 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 ZBTB44Q8NCP5 570 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 MS4A7Q9GZW8 240 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-208ENST00000589797 PLEKHF2Q9H8W4 249 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 PCDHB10Q9UN67 800 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 A0A1W2PNV4 684 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 KRBOX1C9JBD0 128 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 SYNGR1O43759 233 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 CEACAM6P40199 344 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 OR6S1Q8NH40 331 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 MRGPRDQ8TDS7 321 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 TP53TG5Q9Y2B4 290 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 ATP23Q9Y6H3 246 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 FAM24AA6NFZ4 105 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 DHRS7CA6NNS2 312 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 C1orf100Q5SVJ3 147 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 SLC25A40Q8TBP6 338 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 MRPL13Q9BYD1 178 aaKnown RBP12.67□□□□□ -0.38
RETREG3-208ENST00000589797 HEYLQ9NQ87 328 aaPredicted RBP12.67□□□□□ -0.38
RETREG3-208ENST00000589797 PTPRQQ9UMZ3 2332 aa12.67□□□□□ -0.38
RETREG3-208ENST00000589797 ENSAO43768 121 aaKnown RBP12.66□□□□□ -0.38
RETREG3-208ENST00000589797 CPN1P15169 458 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 FBXW9Q5XUX1 488 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 CCL28Q9NRJ3 127 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 EDARQ9UNE0 448 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 A0A1B0GTI1 187 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 SPINT2O43291 252 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 ZP1P60852 638 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 ZFP36L1Q07352 338 aaKnown RBP12.66□□□□□ -0.38
RETREG3-208ENST00000589797 PLAC9Q5JTB6 97 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 SLC25A42Q86VD7 318 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 RBMXL1Q96E39 390 aaKnown RBP12.66□□□□□ -0.38
RETREG3-208ENST00000589797 SLC26A1Q9H2B4 701 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 OR3A1P47881 315 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 NKX6-1P78426 367 aaPredicted RBP12.66□□□□□ -0.38
RETREG3-208ENST00000589797 CATR1Q13166 79 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 OR1S2Q8NGQ3 325 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 PRRX2Q99811 253 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 SOSTQ9BQB4 213 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 GCM1Q9NP62 436 aa12.66□□□□□ -0.38
RETREG3-208ENST00000589797 RCL1Q9Y2P8 373 aaKnown RBP12.66□□□□□ -0.38
RETREG3-208ENST00000589797 ADAM20O43506 726 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 BCL2L11O43521 198 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 CRHP06850 196 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 FSTP19883 344 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 SRSF6Q13247 344 aaKnown RBP12.65□□□□□ -0.38
RETREG3-208ENST00000589797 RGS7BPQ6MZT1 257 aaPredicted RBP12.65□□□□□ -0.38
RETREG3-208ENST00000589797 GFRALQ6UXV0 394 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 ZFP82Q8N141 532 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 SUMF2Q8NBJ7 301 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 FGFBP3Q8TAT2 258 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 WNT5BQ9H1J7 359 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 MPGP29372 298 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 THNSL2Q86YJ6 484 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 TMEM123Q8N131 208 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 BPTFQ12830 3046 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 GPR137BO60478 399 aa12.65□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF17P17021 662 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms