RNA–Protein interactions for RNA: ENST00000589219.1

VPS25-202, Transcript of vacuolar protein sorting 25 homolog, humanhuman

TSL 2

Gene VPS25, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS25-202ENST00000589219 OR10AD1Q8NGE0 317 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 OR51F2Q8NH61 342 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 ANGPTL6Q8NI99 470 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 PPP1R1CQ8WVI7 109 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 BCL2L2Q92843 193 aaPredicted RBP8.56□□□□□ -1.04
VPS25-202ENST00000589219 HIST1H2AAQ96QV6 131 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 SULT4A1Q9BR01 284 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 RTBDNQ9BSG5 229 aaPredicted RBP8.56□□□□□ -1.04
VPS25-202ENST00000589219 PLK3Q9H4B4 646 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 DECR2Q9NUI1 292 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 LUZP4Q9P127 313 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 PRSS50Q9UI38 385 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 ZNF230Q9UIE0 474 aaPredicted RBP8.56□□□□□ -1.04
VPS25-202ENST00000589219 ST3GAL6Q9Y274 331 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 MEMO1Q9Y316 297 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 MPC1Q9Y5U8 109 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 MED12Q93074 2177 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 DOCK10Q96BY6 2186 aa8.56□□□□□ -1.04
VPS25-202ENST00000589219 NCOA6Q14686 2063 aaPredicted RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 TRBV6-7A0A0A0MS04 114 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 C5orf51A6NDU8 294 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 ZNF503-AS2A6NEH8 195 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 CD300LBA8K4G0 201 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 FAM25EA8MYX2 175 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 SDCBPO00560 298 aaPredicted RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 GEMIN2O14893 280 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 SFTPBP07988 381 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 OR5H8P0DN80 308 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 RPS2P15880 293 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 FUT3P21217 361 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 RBMXP38159 391 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 FOXG1P55316 489 aaPredicted RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 PRSS12P56730 875 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 TGFBR3Q03167 851 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 MRPL49Q13405 166 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 IL13RA2Q14627 380 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 TBC1D28Q2M2D7 210 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 EIF2S3LQ2VIR3 472 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 PIGYQ3MUY2 71 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 RNFT1Q5M7Z0 435 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 THOC7Q6I9Y2 204 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 TFAP2EQ6VUC0 442 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 Q6ZS49 121 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 ACOT7LQ6ZUV0 252 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 SLC25A26Q70HW3 274 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 SGPP2Q8IWX5 399 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 SLC30A7Q8NEW0 376 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 OR5A2Q8NGI9 324 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 PRR7Q8TB68 274 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 HPSE2Q8WWQ2 592 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 MAFIPQ8WZ33 124 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 SNRNP40Q96DI7 357 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 CITED4Q96RK1 184 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 VRK1Q99986 396 aaPredicted RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 ZNF2Q9BSG1 426 aaPredicted RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 FAAP24Q9BTP7 215 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 PKIBQ9C010 78 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 C12orf49Q9H741 205 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 RHOFQ9HBH0 211 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 SPACA1Q9HBV2 294 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 CHMP1AQ9HD42 196 aaPredicted RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 C1orf123Q9NWV4 160 aa8.55□□□□□ -1.04
VPS25-202ENST00000589219 RCC2Q9P258 522 aaKnown RBP8.55□□□□□ -1.04
VPS25-202ENST00000589219 HIVEP3Q5T1R4 2406 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 RNF222A6NCQ9 220 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 CRYM-AS1A6NIL9 109 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 EEF1E1-BLOC1S5C9J1V9 151 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 TRAPPC2LH3BP13 241 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 MSTNO14793 375 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 IFNA2P01563 188 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 RRASP10301 218 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 PSMB6P28072 239 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 PTGER4P35408 488 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 UCP3P55916 312 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 UBE2NP61088 152 aaKnown RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 GNG3P63215 75 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 SUPT4H1P63272 117 aaKnown RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 GUSBP1Q15486 140 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 SLC9A3R2Q15599 337 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 HIKESHIQ53FT3 197 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 PRR30Q53SZ7 412 aaPredicted RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 ZNF660Q6AZW8 331 aaPredicted RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 Q6ZS92 163 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 MDP1Q86V88 176 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 ZNF573Q86YE8 665 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 CALHM1Q8IU99 346 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 CISD2Q8N5K1 135 aaKnown RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 INO80EQ8NBZ0 244 aaPredicted RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 C1orf162Q8NEQ5 155 aaPredicted RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 SARAFQ96BY9 339 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 PHYHIPLQ96FC7 376 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 PIK3IP1Q96FE7 263 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 HDHD3Q9BSH5 251 aaPredicted RBP8.54□□□□□ -1.04
VPS25-202ENST00000589219 ZNF442Q9H7R0 627 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 ASF1BQ9NVP2 202 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 RDH8Q9NYR8 311 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 MBD2Q9UBB5 411 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 STARD10Q9Y365 291 aa8.54□□□□□ -1.04
VPS25-202ENST00000589219 IGKV1D-8A0A087WSZ0 117 aa8.53□□□□□ -1.04
VPS25-202ENST00000589219 hCG_1807616A0A1W2PRN6 198 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms