RNA–Protein interactions for RNA: ENST00000588972.1

ATG4D-210, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 632 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-210ENST00000588972 TSHBP01222 138 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 PTHP01270 115 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 IGHV4-38-2P0DP08 117 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 ANPEPP15144 967 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 GGT2P36268 569 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 SLC25A1P53007 311 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 HERV-K104P61576 105 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 HIST1H3AP68431 136 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 SCRN3Q0VDG4 424 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 GGTLC2Q14390 218 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 MAD2L1BPQ15013 274 aaPredicted RBP6.32□□□□□ -1.4
ATG4D-210ENST00000588972 SNCBQ16143 134 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 ALKBH6Q3KRA9 238 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 KLHL12Q53G59 568 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 TMEM255AQ5JRV8 349 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 HIST2H3PS2Q5TEC6 136 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 LINC01590Q5TEZ4 76 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 HIST2H3AQ71DI3 136 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 ZCCHC24Q8N2G6 241 aaKnown RBP6.32□□□□□ -1.4
ATG4D-210ENST00000588972 COQ7Q99807 217 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 RBM4BQ9BQ04 359 aaKnown RBP6.32□□□□□ -1.4
ATG4D-210ENST00000588972 VCX3BQ9H321 246 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 TMPRSS5Q9H3S3 457 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 C1orf198Q9H425 327 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 ZNF442Q9H7R0 627 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 CNOT2Q9NZN8 540 aaKnown RBP6.32□□□□□ -1.4
ATG4D-210ENST00000588972 ARFGEF3Q5TH69 2177 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 DYSFO75923 2080 aa6.32□□□□□ -1.4
ATG4D-210ENST00000588972 ZNF732B4DXR9 585 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 PRR23D1E9PI22 279 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ZNF593O00488 134 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 CASQ2O14958 399 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 MLNRO43193 412 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 LY6HO94772 140 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 NGFP01138 241 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 MT-ND2P03891 347 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 HMGN1P05114 100 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ALPLP05186 524 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 PRR23D2P0DMB1 279 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ZNF823P16415 610 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 PAICSP22234 425 aaKnown RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 SLC2A5P22732 501 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ANOS1P23352 680 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 FMO3P31513 532 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 GLRXP35754 106 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 MPV17P39210 176 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 NAA10P41227 235 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ALDH3B1P43353 468 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 RPS23P62266 143 aaKnown RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 SNRPD2P62316 118 aaKnown RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ESRRGP62508 458 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 APOFQ13790 326 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 SLX4IPQ5VYV7 408 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 C12orf73Q69YU5 71 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 DCXRQ7Z4W1 244 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ERI1Q8IV48 349 aaKnown RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 CBR4Q8N4T8 237 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 OR1F12Q8NHA8 337 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 SLC25A40Q8TBP6 338 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 GTF3AQ92664 365 aaKnown RBP6.31□□□□□ -1.4
ATG4D-210ENST00000588972 PLEKHA8Q96JA3 519 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 SLC29A1Q99808 456 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 GABARAPL3Q9BY60 117 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 EGLN1Q9GZT9 426 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 ACOXLQ9NUZ1 547 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 CYB5R1Q9UHQ9 305 aa6.31□□□□□ -1.4
ATG4D-210ENST00000588972 IGHV4-61A0A0C4DH41 118 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 CCDC182A6NF36 153 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 SNURFLB1AK76 121 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 F5H5K5 113 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 H0YJX3 145 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 CDK2AP2O75956 126 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 SFTPBP07988 381 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 ADRA2AP08913 450 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 MRPL3P09001 348 aaKnown RBP6.3□□□□□ -1.4
ATG4D-210ENST00000588972 COX5BP10606 129 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 SSTP61278 116 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 PPP1CBP62140 327 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 HERV-K104P63124 156 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 SCGB2A2Q13296 93 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 GPR50Q13585 617 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 EIF2B1Q14232 305 aaKnown RBP6.3□□□□□ -1.4
ATG4D-210ENST00000588972 SPHARQ15513 63 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 CARTPTQ16568 116 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 RSPO1Q2MKA7 263 aaPredicted RBP6.3□□□□□ -1.4
ATG4D-210ENST00000588972 LCN1P1Q5VSP4 162 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 C17orf107Q6ZR85 190 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 DPY19L4Q7Z388 723 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 PACRGLQ8N7B6 248 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 TCEANCQ8N8B7 351 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 OR6N2Q8NGY6 317 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 SGMS2Q8NHU3 365 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 MRPL24Q96A35 216 aaKnown RBP6.3□□□□□ -1.4
ATG4D-210ENST00000588972 NEDD4LQ96PU5 975 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 IL4I1Q96RQ9 567 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 MBOAT4Q96T53 435 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 AMELYQ99218 206 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 PITX2Q99697 317 aa6.3□□□□□ -1.4
ATG4D-210ENST00000588972 DOK1Q99704 481 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms