RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 KLF14Q8TD94 323 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 MRGPRFQ96AM1 343 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 MARS2Q96GW9 593 aaKnown RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 POM121Q96HA1 1249 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF488Q96MN9 340 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 SLX1AQ9BQ83 275 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 ALX4Q9H161 411 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 OR51I2Q9H344 312 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 PIGMQ9H3S5 423 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF442Q9H7R0 627 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 CHMP1AQ9HD42 196 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 DLL4Q9NR61 685 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 PLSCR3Q9NRY6 295 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 CA10Q9NS85 328 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 MTCH1Q9NZJ7 389 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 SH3BGRL2Q9UJC5 107 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 NPTNQ9Y639 398 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 MGAQ8IWI9 3026 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 IGKV1D-8A0A087WSZ0 117 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 A0A0G2JNJ9 132 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 FAM221AA4D161 298 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 H3BUI4 141 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 TIMM8AO60220 97 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 GIPP09681 153 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 AKR1C4P17516 323 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 BMP5P22003 454 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 DNASE1P24855 282 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 CD34P28906 385 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 OPRM1P35372 400 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 NPY4RP50391 375 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 DHRS2Q13268 280 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 IKZF1Q13422 519 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 MPV17LQ2QL34 196 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF718Q3SXZ3 478 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 C4orf17Q53FE4 359 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 NHLRC3Q5JS37 347 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 TIMM23BQ5SRD1 257 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 C11orf88Q6PI97 169 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 SLC25A42Q86VD7 318 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 FAM169BQ8N8A8 192 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 ADAD2Q8NCV1 583 aaKnown RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 Q8NFD4 153 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 TERB2Q8NHR7 220 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 SNRNP40Q96DI7 357 aaKnown RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 MUCL1Q96DR8 90 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 HYLS1Q96M11 299 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 TRAF4Q9BUZ4 470 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 BCL2L14Q9BZR8 327 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 RANBP3Q9H6Z4 567 aaPredicted RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 FN3KRPQ9HA64 309 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF286AQ9HBT8 521 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 IL36RNQ9UBH0 155 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 Q9UFV3 132 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 PURGQ9UJV8 347 aaKnown RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 TINAGQ9UJW2 476 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 PAIP2BQ9ULR5 123 aaKnown RBP7.47□□□□□ -1.21
SMAD4-206ENST00000588860 FZR1Q9UM11 496 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 EDARQ9UNE0 448 aa7.47□□□□□ -1.21
SMAD4-206ENST00000588860 ATMQ13315 3056 aa7.46□□□□□ -1.21
SMAD4-206ENST00000588860 SHANK1Q9Y566 2161 aa7.46□□□□□ -1.21
SMAD4-206ENST00000588860 TMEM210A6NLX4 147 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 PRSS44E7EML9 344 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 F5H5P2 479 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 H0YL77 283 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 RHBDL1O75783 438 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 SIX6O95475 246 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 HLA-AP01891 365 aaKnown RBP7.46□□□□□ -1.22
SMAD4-206ENST00000588860 PGAM2P15259 253 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 KITLGP21583 273 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 TUBG1P23258 451 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 ZBTB25P24278 435 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 FPR2P25090 351 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 DUSP1P28562 367 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 GCH1P30793 250 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 PMELP40967 661 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 RIPPLY3P57055 190 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 RAP2BP61225 183 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 IFITM2Q01629 132 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 NAAAQ02083 359 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 RBPJQ06330 500 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 PPP1R1AQ13522 171 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 LY6DQ14210 128 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 IL13RA2Q14627 380 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 DAZAP2Q15038 168 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-206ENST00000588860 GRK1Q15835 563 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 C2orf68Q2NKX9 166 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 TMEM211Q6ICI0 200 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 SLC22A25Q6T423 547 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 NCCRP1Q6ZVX7 275 aaPredicted RBP7.46□□□□□ -1.22
SMAD4-206ENST00000588860 LYG2Q86SG7 212 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 MRGPRGQ86SM5 289 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 WDR86Q86TI4 376 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 LINC00596Q86U02 117 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 FAM58AQ8N1B3 248 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 C9orf62Q8N4C0 152 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 SCCPDHQ8NBX0 429 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 OR8G5Q8NG78 346 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 OR2T35Q8NGX2 323 aa7.46□□□□□ -1.22
SMAD4-206ENST00000588860 GRPEL2Q8TAA5 225 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms