RNA–Protein interactions for RNA: ENST00000587881.1

NEDD4L-220, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 5

Gene NEDD4L, Length 1,984 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-220ENST00000587881 Q8NFD4 153 aa12.4□□□□□ -0.42
NEDD4L-220ENST00000587881 OR52M1Q8NGK5 317 aa12.4□□□□□ -0.42
NEDD4L-220ENST00000587881 TMEM45BQ96B21 275 aa12.4□□□□□ -0.42
NEDD4L-220ENST00000587881 BSCL2Q96G97 398 aaPredicted RBP12.4□□□□□ -0.42
NEDD4L-220ENST00000587881 WFDC1Q9HC57 220 aa12.4□□□□□ -0.42
NEDD4L-220ENST00000587881 FAM86C1Q9NVL1 165 aa12.4□□□□□ -0.42
NEDD4L-220ENST00000587881 GNMTQ14749 295 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 SRSF7Q16629 238 aaKnown RBP eCLIP12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 DMBX1Q8NFW5 382 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 MAFAQ8NHW3 353 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 RXFP4Q8TDU9 374 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 AKR1E2Q96JD6 320 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 CACFD1Q9UGQ2 172 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 ATPIF1Q9UII2 106 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 TCFL5Q9UL49 500 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 STRAPQ9Y3F4 350 aaKnown RBP12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 PRSS44E7EML9 344 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 RPL36A-HNRNPH2H7BZ11 118 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 LINC01387J3KSC0 135 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 MPPED1O15442 326 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 OR7C1O76099 320 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 PPYP01298 95 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 CRYBA1P05813 215 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 GDF1P27539 372 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 SSPNQ14714 243 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 PDCD1Q15116 288 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 DCAF12Q5T6F0 453 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 CLEC9AQ6UXN8 241 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 Q6ZS49 121 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 SLC25A26Q70HW3 274 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF611Q8N823 705 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 KDF1Q8NAX2 398 aaPredicted RBP12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 OR4D5Q8NGN0 318 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 OR11L1Q8NGX0 322 aa12.39□□□□□ -0.43
NEDD4L-220ENST00000587881 C3orf85A0A1B0GTC6 90 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 MEX3AA1L020 520 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 COLCA2A8K830 154 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 CDS2O95674 445 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 GLI4P10075 376 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 PAX6P26367 422 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 CAMLGP49069 296 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 CYB561P49447 251 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 GFRA1P56159 465 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 MIDNQ504T8 468 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 TRIM61Q5EBN2 209 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 COLCA1Q6ZS62 124 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 CALHM1Q8IU99 346 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 C15orf54Q8N8G6 183 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 CPEB3Q8NE35 698 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 SECTM1Q8WVN6 248 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 DEPPQ9NTK1 212 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 RCL1Q9Y2P8 373 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 PATE3B3GLJ2 98 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF587BE7ETH6 402 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 MRPL33O75394 65 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 SERPINA7P05543 415 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 TDGF1P13385 188 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 FOLR2P14207 255 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 RPS18P62269 152 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 GUK1Q16774 197 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 Q6ZPA2 131 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 DPPA2Q7Z7J5 298 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 SAXO1Q8IYX7 474 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 SLC35G3Q8N808 338 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 SNIP1Q8TAD8 396 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 ABHD3Q8WU67 409 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF845Q96IR2 970 aaPredicted RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 TP53RKQ96S44 253 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 PARP12Q9H0J9 701 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 TMEM222Q9H0R3 208 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 C19orf12Q9NSK7 152 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 P4HTMQ9NXG6 502 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 ZDHHC8Q9ULC8 765 aa12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 NOSIPQ9Y314 301 aaKnown RBP12.38□□□□□ -0.43
NEDD4L-220ENST00000587881 PQLC2LA1A4F0 135 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 TRDCB7Z8K6 153 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 NME2P1O60361 137 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 NPBWR2P48146 333 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 PPT1P50897 306 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 NHLH2Q02577 135 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 ZNF616Q08AN1 781 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 SLC39A7Q92504 469 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 REPIN1Q9BWE0 567 aaKnown RBP12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 LINC00470Q9BZP3 86 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 RNF122Q9H9V4 155 aa12.37□□□□□ -0.43
NEDD4L-220ENST00000587881 DOCK10Q96BY6 2186 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 IGKV3D-15A0A087WSY6 115 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 GNRHRP30968 328 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 RND3P61587 244 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 DAZAP2Q15038 168 aaPredicted RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 IGSF11Q5DX21 431 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 C6orf15Q6UXA7 325 aaPredicted RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 EXTL1Q92935 676 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 TMEM56Q96MV1 263 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 SCRT1Q9BWW7 348 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 EGLN1Q9GZT9 426 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 BOKQ9UMX3 212 aaPredicted RBP12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 LHX6Q9UPM6 363 aa12.36□□□□□ -0.43
NEDD4L-220ENST00000587881 TMEM56-RWDD3S4R434 201 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms