RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 BCL3P20749 454 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 CDK2P24941 298 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 OR3A1P47881 315 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 ATP1B3P54709 279 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 KHDC1LQ5JSQ8 128 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 SPIN3Q5JUX0 258 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 C10orf99Q6UWK7 81 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 BAIAP2L2Q6UXY1 529 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 GID4Q8IVV7 300 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 LINC00482Q8N8I6 264 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 PP6455Q8WZ26 134 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 CORO2AQ92828 525 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 TBX5Q99593 518 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 GPR61Q9BZJ8 451 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 TAS2R3Q9NYW6 316 aa11.19□□□□□ -0.62
DNMT1-213ENST00000587604 DNAH9Q9NYC9 4486 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 A0A1W2PQL4 384 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-213ENST00000587604 FUOMA2VDF0 154 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 ZAR1LA6NP61 321 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 E9PQ18 207 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 PRKACAP17612 351 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 CD34P28906 385 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
DNMT1-213ENST00000587604 CEACAM3P40198 252 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 MTCP1P56278 107 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 CD69Q07108 199 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 FLOT2Q14254 428 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 KPNB1Q14974 876 aaKnown RBP11.18□□□□□ -0.62
DNMT1-213ENST00000587604 PRAMEF5Q5TYX0 476 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 C12orf73Q69YU5 71 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 OSR2Q8N2R0 312 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 BCAS4Q8TDM0 211 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 DPF1Q92782 380 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 WWC2-AS2Q96NR7 200 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 IL4I1Q96RQ9 567 aa11.18□□□□□ -0.62
DNMT1-213ENST00000587604 WARS2Q9UGM6 360 aaKnown RBP11.18□□□□□ -0.62
DNMT1-213ENST00000587604 SH2D7A6NKC9 451 aaPredicted RBP11.17□□□□□ -0.62
DNMT1-213ENST00000587604 OOSP1A8MZH6 123 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 LY6LH3BQJ8 138 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 BUB1B-PAK6H3BSN5 160 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 SIRPB1O00241 398 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 TOR1AO14656 332 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 SH2D1BO14796 132 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 MITFO75030 526 aaPredicted RBP11.17□□□□□ -0.62
DNMT1-213ENST00000587604 CALCBP10092 127 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 PRKACBP22694 351 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 LMO1P25800 156 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 EPHA2P29317 976 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 POU3F4P49335 361 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 PRRX1P54821 245 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 PDZK1IP1Q13113 114 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 TPTE2P1Q5T6R2 138 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 CCDC144NLQ6NUI1 221 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 MRPL41Q8IXM3 137 aaKnown RBP11.17□□□□□ -0.62
DNMT1-213ENST00000587604 PRSS35Q8N3Z0 413 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 UTP4Q969X6 686 aaKnown RBP11.17□□□□□ -0.62
DNMT1-213ENST00000587604 B9D2Q9BPU9 175 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 HMG20AQ9NP66 347 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 KRT84Q9NSB2 600 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 PCDHGB5Q9Y5G0 923 aa11.17□□□□□ -0.62
DNMT1-213ENST00000587604 A0A087X0M5 115 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 IGKV1-9A0A0C4DH69 117 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 LOC107986453A0A1B0GWG9 222 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 A0A1B0GX30 115 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 PSMB11A5LHX3 300 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 FAM172BPA6NC97 362 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 OR2H2O95918 312 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 UBCP0CG48 685 aaKnown RBP11.16□□□□□ -0.62
DNMT1-213ENST00000587604 FAM106CPP0CH98 169 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 HTR1FP30939 366 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 GDNFP39905 211 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 MNDAP41218 407 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 GLIPR1P48060 266 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 SNU13P55769 128 aaKnown RBP11.16□□□□□ -0.62
DNMT1-213ENST00000587604 AESQ08117 197 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 HLA-DRB5Q30154 266 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 C9orf152Q5JTZ5 239 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 UTS2BQ765I0 119 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 RDH10Q8IZV5 341 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 CCDC197Q8NCU1 140 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 OR51D1Q8NGF3 324 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 OR4D6Q8NGJ1 314 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 ADAT3Q96EY9 351 aaPredicted RBP11.16□□□□□ -0.62
DNMT1-213ENST00000587604 ZNF286AQ9HBT8 521 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 EXOSC4Q9NPD3 245 aaKnown RBP11.16□□□□□ -0.62
DNMT1-213ENST00000587604 GSTK1Q9Y2Q3 226 aa11.16□□□□□ -0.62
DNMT1-213ENST00000587604 ODAMA1E959 279 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 ATF1P18846 271 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 PTGFRP43088 359 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 THBS3P49746 956 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 DCTN2Q13561 401 aaKnown RBP11.15□□□□□ -0.62
DNMT1-213ENST00000587604 TMEM244Q5VVB8 128 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 ETV3LQ6ZN32 361 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 LHFPL2Q6ZUX7 228 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 ZNF329Q86UD4 541 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 THNSL2Q86YJ6 484 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 OR10H4Q8NGA5 316 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 SPSB1Q96BD6 273 aa11.15□□□□□ -0.62
DNMT1-213ENST00000587604 MCRIP2Q9BUT9 160 aaKnown RBP11.15□□□□□ -0.62
DNMT1-213ENST00000587604 COMMD4Q9H0A8 199 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms