RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 Q6ZTK2 550 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 Q8N402 240 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 SEH1LQ96EE3 360 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 RCC2Q9P258 522 aaKnown RBP12.52□□□□□ -0.4
NFIX-208ENST00000587260 IL36RNQ9UBH0 155 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 EDARQ9UNE0 448 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 KCNK7Q9Y2U2 307 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 NPTNQ9Y639 398 aa12.52□□□□□ -0.4
NFIX-208ENST00000587260 SPG11Q96JI7 2443 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 IGHV3OR15-7A0A075B7D8 119 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 GABARAPH6UMI1 98 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 SULT1C2O00338 296 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 PDCD6O75340 191 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 RP2O75695 350 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 KNG1P01042 644 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 GLAP06280 429 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 FUT3P21217 361 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 GABRR1P24046 479 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 CHATP28329 748 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 MADCAM1Q13477 382 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 DCTN2Q13561 401 aaKnown RBP12.52□□□□□ -0.41
NFIX-208ENST00000587260 PNLIPRP3Q17RR3 467 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 SMIM21Q3B7S5 101 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 SFRP4Q6FHJ7 346 aaPredicted RBP12.52□□□□□ -0.41
NFIX-208ENST00000587260 FIP1L1Q6UN15 594 aaKnown RBP12.52□□□□□ -0.41
NFIX-208ENST00000587260 SNX29P2Q8IUI4 249 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 CHST4Q8NCG5 386 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 SMIM4Q8WVI0 70 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 ST8SIA4Q92187 359 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 ARHGAP5-AS1Q96IT6 56 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 SCPEP1Q9HB40 452 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 SPACA1Q9HBV2 294 aa12.52□□□□□ -0.41
NFIX-208ENST00000587260 SERPINE3A8MV23 424 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 TMEM178BH3BS89 294 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 UPK1BO75841 260 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 CSF3P09919 207 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 LMO1P25800 156 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 PRSS3P35030 304 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 MRPS11P82912 194 aaKnown RBP12.51□□□□□ -0.41
NFIX-208ENST00000587260 BAK1Q16611 211 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 DEFB113Q30KQ7 82 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 Q6P435 159 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 C1orf87Q8N0U7 546 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 NEDD4LQ96PU5 975 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 PECRQ9BY49 303 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 GSX2Q9BZM3 304 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 DLL4Q9NR61 685 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 BEX4Q9NWD9 120 aaPredicted RBP12.51□□□□□ -0.41
NFIX-208ENST00000587260 DNAJB11Q9UBS4 358 aa12.51□□□□□ -0.41
NFIX-208ENST00000587260 OR7C1O76099 320 aaPredicted RBP12.5□□□□□ -0.41
NFIX-208ENST00000587260 FSTL3O95633 263 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 TFF1P04155 84 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 IL7P13232 177 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 GNB3P16520 340 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 AVPI1Q5T686 147 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 HACD4Q5VWC8 232 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 DEFB108BQ8NET1 73 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 GPX8Q8TED1 209 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 THAP7Q9BT49 309 aaPredicted RBP12.5□□□□□ -0.41
NFIX-208ENST00000587260 CHODLQ9H9P2 273 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 BARX1Q9HBU1 254 aaPredicted RBP12.5□□□□□ -0.41
NFIX-208ENST00000587260 PLEKHJ1Q9NW61 149 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 ZNF581Q9P0T4 197 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 GLS2Q9UI32 602 aa12.5□□□□□ -0.41
NFIX-208ENST00000587260 RBMX2Q9Y388 322 aaKnown RBP12.5□□□□□ -0.41
NFIX-208ENST00000587260 MEIOCA2RUB1 952 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 TMEM235A6NFC5 223 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 SH2D1BO14796 132 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 PPIHO43447 177 aaKnown RBP12.49□□□□□ -0.41
NFIX-208ENST00000587260 PTHLHP12272 177 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 PAX1P15863 534 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 MUC1P15941 1255 aaPredicted RBP12.49□□□□□ -0.41
NFIX-208ENST00000587260 DUSP1P28562 367 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 DGCR2P98153 550 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 IFITM3Q01628 133 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 SSBP1Q04837 148 aaKnown RBP12.49□□□□□ -0.41
NFIX-208ENST00000587260 IKZF1Q13422 519 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 TEX36Q5VZQ5 186 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 C6orf201Q7Z4U5 140 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 OR52I2Q8NH67 350 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 FCAMRQ8WWV6 532 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 NINJ1Q92982 152 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 TRIM63Q969Q1 353 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 ZMAT3Q9HA38 289 aaKnown RBP12.49□□□□□ -0.41
NFIX-208ENST00000587260 NLKQ9UBE8 527 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 OR14J1Q9UGF5 321 aa12.49□□□□□ -0.41
NFIX-208ENST00000587260 PPIAL4EA0A075B759 164 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 TRAV24A0A0B4J272 114 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 ISPDA4D126 451 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 OOEPA6NGQ2 149 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 PPIAL4DF5H284 164 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 DEGS1O15121 323 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 OR2H2O95918 312 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 LPLP06858 475 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 PPIAL4FP0DN26 164 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 CEBPDP49716 269 aaPredicted RBP12.48□□□□□ -0.41
NFIX-208ENST00000587260 BTG1P62324 171 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 PDCD1Q15116 288 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 ZMYND11Q15326 602 aa12.48□□□□□ -0.41
NFIX-208ENST00000587260 SHEQ5VZ18 495 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms