RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 MRPS24Q96EL2 167 aaKnown RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 NKX3-1Q99801 234 aaPredicted RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 UQCC2Q9BRT2 126 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 METTL9Q9H1A3 318 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 OCEL1Q9H607 264 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 NOX4Q9NPH5 578 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 RBFOX1Q9NWB1 397 aaKnown RBP11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 DUX4Q9UBX2 424 aa11.39□□□□□ -0.59
PRKCSH-202ENST00000585540 hADV38S2A0JD32 116 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 MAGEA13PA6NCF6 341 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 TRIM77I1YAP6 450 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 ARL6IP5O75915 188 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 CSTBP04080 98 aaKnown RBP11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 PRTN3P24158 256 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 PSMB9P28065 219 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 TGFBR2P37173 567 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 PTGFRP43088 359 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 NPBWR2P48146 333 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 ARF6P62330 175 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM27D1Q5T7N8 215 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 UNQ9370/PRO34162Q6UXP9 181 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 PHC2Q8IXK0 858 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 OR52N4Q8NGI2 321 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 OR5D18Q8NGL1 313 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 TMEM203Q969S6 136 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 TBX15Q96SF7 602 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 PCGF1Q9BSM1 259 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 SLITRK2Q9H156 845 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 PRDM13Q9H4Q3 707 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 NCOR1P1Q9H4R4 102 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 TCF7L1Q9HCS4 588 aa11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 SF3B6Q9Y3B4 125 aaKnown RBP11.38□□□□□ -0.59
PRKCSH-202ENST00000585540 NIPBLQ6KC79 2804 aaeCLIP11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 TRAV8-7A0A075B6U6 113 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 IGHV1-69DA0A0B4J2H0 117 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 IGKV1-12A0A0C4DH73 117 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 CLDN34H7C241 214 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 ANGPTL7O43827 346 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 SC5DO75845 299 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 IGKV1D-12P01611 117 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 IGHV1-69P01742 117 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 SFTPBP07988 381 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 UBBP0CG47 229 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 SELLP14151 372 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 GALP22466 123 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 PAX5Q02548 391 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 RSU1Q15404 277 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 NEDD8Q15843 81 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 MPV17LQ2QL34 196 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 ACSM3Q53FZ2 586 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 VMO1Q7Z5L0 202 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 SATL1Q86VE3 508 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM185AQ8N0U4 392 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 TMEM86BQ8N661 226 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM192AQ9GZU8 254 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 ZNF696Q9H7X3 374 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 IFT22Q9H7X7 185 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 GSTK1Q9Y2Q3 226 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 LINC00312Q9Y6C7 94 aa11.37□□□□□ -0.59
PRKCSH-202ENST00000585540 CENPVL3A0A0U1RRI6 287 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A10PA6NDY2 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A18PA6NE21 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A16PA6NEW6 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A20PA6NIJ5 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A8PA6NJQ4 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A7PA6NKC0 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A22PA8MWA6 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A12PA8MX19 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A5PA8MXJ8 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A23PA8MXZ1 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 F8VVB4 439 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 F8VWA3 439 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 OR2H2O95918 312 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 TFF1P04155 84 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A15PP0C7V4 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A13PP0C7W8 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A14PP0C7W9 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 FAM90A24PP0C7X0 464 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 IGHV4-38-2P0DP08 117 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 ZNF44P15621 663 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 GABRA5P31644 462 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 GP2P55259 537 aaKnown RBP11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 ERVFRD-1P60508 538 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 GRK1Q15835 563 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 HSD17B12Q53GQ0 312 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 GLT8D1Q68CQ7 371 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 C17orf107Q6ZR85 190 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 SLC6A7Q99884 636 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 PPIL3Q9H2H8 161 aaKnown RBP11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 HEXA-AS1Q9H8Q6 139 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 SPACA1Q9HBV2 294 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 NDUFB11Q9NX14 153 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 ZNF69Q9UC07 566 aa11.36□□□□□ -0.59
PRKCSH-202ENST00000585540 RGS9O75916 674 aaPredicted RBP11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 MAS1P04201 325 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 UCHL1P09936 223 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 GTF2F2P13984 249 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 GABRR1P24046 479 aa11.35□□□□□ -0.59
PRKCSH-202ENST00000585540 PSMD7P51665 324 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms