RNA–Protein interactions for RNA: ENST00000585428.1

SDF2-202, Transcript of stromal cell derived factor 2, humanhuman

TSL 1 (best)

Gene SDF2, Length 924 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-202ENST00000585428 RBP2P50120 134 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 SPIN3Q5JUX0 258 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 C12orf73Q69YU5 71 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 OSR2Q8N2R0 312 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 PRSS35Q8N3Z0 413 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 OR4X2Q8NGF9 303 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 BORCS8Q96FH0 119 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 IL4I1Q96RQ9 567 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 PLEKHA1Q9HB21 404 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 HMG20AQ9NP66 347 aa11.5□□□□□ -0.57
SDF2-202ENST00000585428 A0A087X0M5 115 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 A0A1B0GX30 115 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A18PA6NE21 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A16PA6NEW6 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A20PA6NIJ5 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 SH2D7A6NKC9 451 aaPredicted RBP11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A9PA6NNJ1 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A12PA8MX19 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A5PA8MXJ8 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 BUB1B-PAK6H3BSN5 160 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 SH2D1BO14796 132 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 MITFO75030 526 aaPredicted RBP11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A15PP0C7V4 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A13PP0C7W8 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A14PP0C7W9 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 FAM90A24PP0C7X0 464 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 CALCBP10092 127 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 BCL3P20749 454 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 CDK2P24941 298 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 HOXD3P31249 432 aaPredicted RBP11.49□□□□□ -0.57
SDF2-202ENST00000585428 GDNFP39905 211 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 GLIPR1P48060 266 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 ATP1B3P54709 279 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 PDZK1IP1Q13113 114 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 PRAMEF5Q5TYX0 476 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 SPATA24Q86W54 205 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 MRPL41Q8IXM3 137 aaKnown RBP11.49□□□□□ -0.57
SDF2-202ENST00000585428 RDH10Q8IZV5 341 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 CAPSLQ8WWF8 208 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 PP6455Q8WZ26 134 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 CREB3L1Q96BA8 519 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 B9D2Q9BPU9 175 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 ADI1Q9BV57 179 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 PRRG3Q9BZD7 231 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 GAL3ST2Q9H3Q3 398 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 WARS2Q9UGM6 360 aaKnown RBP11.49□□□□□ -0.57
SDF2-202ENST00000585428 GLS2Q9UI32 602 aa11.49□□□□□ -0.57
SDF2-202ENST00000585428 TRGV10A0A0A0MS01 117 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 M0QZK8 103 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 CLIC3O95833 236 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 OR2H2O95918 312 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 CGB3P0DN86 165 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 CGB7P0DN87 165 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 MTCP1P56278 107 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 ISL1P61371 349 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 HLA-DRB5Q30154 266 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 UTF1Q5T230 341 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 TPTE2P1Q5T6R2 138 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 ETV3LQ6ZN32 361 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 TRAPPC6BQ86SZ2 158 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 THNSL2Q86YJ6 484 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 GID4Q8IVV7 300 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 BCAS4Q8TDM0 211 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 ADAT3Q96EY9 351 aaPredicted RBP11.48□□□□□ -0.57
SDF2-202ENST00000585428 WWC2-AS2Q96NR7 200 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 TBX5Q99593 518 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 ZNF286AQ9HBT8 521 aa11.48□□□□□ -0.57
SDF2-202ENST00000585428 IGKV1-12A0A0C4DH73 117 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 FUOMA2VDF0 154 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 OOSP1A8MZH6 123 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 FAM107AO95990 144 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 IGKV1D-12P01611 117 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 PRKACAP17612 351 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 ATF1P18846 271 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 HTR1FP30939 366 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 CEACAM3P40198 252 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 THBS3P49746 956 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 ARHGDIBP52566 201 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 PRRX1P54821 245 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 CD69Q07108 199 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 AESQ08117 197 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 FLOT2Q14254 428 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 KPNB1Q14974 876 aaKnown RBP11.47□□□□□ -0.57
SDF2-202ENST00000585428 KDM4DQ6B0I6 523 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 UTS2BQ765I0 119 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 POMPQ9Y244 141 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 GSTK1Q9Y2Q3 226 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 DSCAML1Q8TD84 2053 aa11.47□□□□□ -0.57
SDF2-202ENST00000585428 TENM3Q9P273 2699 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 FAM172BPA6NC97 362 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 E9PQ18 207 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 SIRPB1O00241 398 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 TOR1AO14656 332 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 CYB5AP00167 134 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 CSN2P05814 226 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 FAM106CPP0CH98 169 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 PRKACBP22694 351 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 KIR3DL2P43630 455 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 C17orf58Q2M2W7 97 aa11.46□□□□□ -0.57
SDF2-202ENST00000585428 Q6P435 159 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms