RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 CREB3L1Q96BA8 519 aa12.04□□□□□ -0.48
VAPA-209ENST00000585042 PHF21AQ96BD5 680 aa12.04□□□□□ -0.48
VAPA-209ENST00000585042 RDH12Q96NR8 316 aa12.04□□□□□ -0.48
VAPA-209ENST00000585042 LIN7BQ9HAP6 207 aa12.04□□□□□ -0.48
VAPA-209ENST00000585042 RHOFQ9HBH0 211 aa12.04□□□□□ -0.48
VAPA-209ENST00000585042 AURKAIP1Q9NWT8 199 aaPredicted RBP12.04□□□□□ -0.48
VAPA-209ENST00000585042 DPM3Q9P2X0 92 aa12.04□□□□□ -0.48
VAPA-209ENST00000585042 GMPPBQ9Y5P6 360 aa12.04□□□□□ -0.48
VAPA-209ENST00000585042 UBCP0CG48 685 aaKnown RBP12.03□□□□□ -0.48
VAPA-209ENST00000585042 CD33P20138 364 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 PRKACBP22694 351 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 GABRR1P24046 479 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 BDH1Q02338 343 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 Q6ZS46 218 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 UTS2BQ765I0 119 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 SSX6Q7RTT6 188 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 KCTD20Q7Z5Y7 419 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 CENPVQ7Z7K6 275 aaPredicted RBP12.03□□□□□ -0.48
VAPA-209ENST00000585042 ZNF596Q8TC21 504 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 Q96MT0 163 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 KRTAP3-3Q9BYR6 98 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 KRTAP3-2Q9BYR7 98 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 GAL3ST2Q9H3Q3 398 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 TAS2R3Q9NYW6 316 aa12.03□□□□□ -0.48
VAPA-209ENST00000585042 SH2D1BO14796 132 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 PSPNO60542 156 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 DUS4LO95620 317 aaKnown RBP12.02□□□□□ -0.49
VAPA-209ENST00000585042 IGHA1P01876 353 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 LMO1P25800 156 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 ISL1P61371 349 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 SNRPGP62308 76 aaKnown RBP12.02□□□□□ -0.49
VAPA-209ENST00000585042 EDDM3AQ14507 147 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 ODF4Q2M2E3 257 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 SLC25A30Q5SVS4 291 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 TMEM244Q5VVB8 128 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 FOXB2Q5VYV0 432 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 HEPN1Q6WQI6 88 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 ABHD12Q8N2K0 398 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 ZNF555Q8NEP9 628 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 OR4P4Q8NGL7 312 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 CAPSLQ8WWF8 208 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
VAPA-209ENST00000585042 MYCBPQ99417 103 aaPredicted RBP12.02□□□□□ -0.49
VAPA-209ENST00000585042 TSSC4Q9Y5U2 329 aaPredicted RBP12.02□□□□□ -0.49
VAPA-209ENST00000585042 TRGV10A0A0A0MS01 117 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 MEX3AA1L020 520 aaKnown RBP12.01□□□□□ -0.49
VAPA-209ENST00000585042 LEUTXA8MZ59 168 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 ENTPD6O75354 484 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 ISG15P05161 165 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 CD34P28906 385 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 CEACAM3P40198 252 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 NPBWR2P48146 333 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 MTCP1P56278 107 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 P2RX3P56373 397 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 PDZK1IP1Q13113 114 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 RCN1Q15293 331 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 LHFPL2Q6ZUX7 228 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 PRSS35Q8N3Z0 413 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 PACRGLQ8N7B6 248 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 SPSB1Q96BD6 273 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 TBX5Q99593 518 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 SLC29A1Q99808 456 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 HMG20AQ9NP66 347 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 SMPD3Q9NY59 655 aaPredicted RBP12.01□□□□□ -0.49
VAPA-209ENST00000585042 PCDHGB5Q9Y5G0 923 aa12.01□□□□□ -0.49
VAPA-209ENST00000585042 LOC100130705A0A1B0GUX0 176 aa12□□□□□ -0.49
VAPA-209ENST00000585042 LOC107986453A0A1B0GWG9 222 aa12□□□□□ -0.49
VAPA-209ENST00000585042 OOSP1A8MZH6 123 aa12□□□□□ -0.49
VAPA-209ENST00000585042 M0QZK8 103 aa12□□□□□ -0.49
VAPA-209ENST00000585042 OR2F2O95006 317 aa12□□□□□ -0.49
VAPA-209ENST00000585042 IGLV1-47P01700 117 aa12□□□□□ -0.49
VAPA-209ENST00000585042 MT-ND2P03891 347 aa12□□□□□ -0.49
VAPA-209ENST00000585042 ATF1P18846 271 aa12□□□□□ -0.49
VAPA-209ENST00000585042 OR3A1P47881 315 aa12□□□□□ -0.49
VAPA-209ENST00000585042 SLC35A2P78381 396 aa12□□□□□ -0.49
VAPA-209ENST00000585042 FDX2Q6P4F2 183 aa12□□□□□ -0.49
VAPA-209ENST00000585042 FAM220AQ7Z4H9 259 aa12□□□□□ -0.49
VAPA-209ENST00000585042 TRAPPC6BQ86SZ2 158 aa12□□□□□ -0.49
VAPA-209ENST00000585042 SAXO1Q8IYX7 474 aa12□□□□□ -0.49
VAPA-209ENST00000585042 TPRX1Q8N7U7 411 aa12□□□□□ -0.49
VAPA-209ENST00000585042 OR10H4Q8NGA5 316 aa12□□□□□ -0.49
VAPA-209ENST00000585042 MRPL48Q96GC5 212 aaKnown RBP12□□□□□ -0.49
VAPA-209ENST00000585042 RCC1LQ96I51 464 aaKnown RBP12□□□□□ -0.49
VAPA-209ENST00000585042 RBM14Q96PK6 669 aaKnown RBP12□□□□□ -0.49
VAPA-209ENST00000585042 MBOAT4Q96T53 435 aa12□□□□□ -0.49
VAPA-209ENST00000585042 CHST6Q9GZX3 395 aa12□□□□□ -0.49
VAPA-209ENST00000585042 VCXQ9H320 206 aa12□□□□□ -0.49
VAPA-209ENST00000585042 DCLRE1BQ9H816 532 aa12□□□□□ -0.49
VAPA-209ENST00000585042 RBFOX1Q9NWB1 397 aaKnown RBP12□□□□□ -0.49
VAPA-209ENST00000585042 FAM118AQ9NWS6 357 aa12□□□□□ -0.49
VAPA-209ENST00000585042 HHLA2Q9UM44 414 aa12□□□□□ -0.49
VAPA-209ENST00000585042 IGKV1-9A0A0C4DH69 117 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 TCRBV4S1A1TA0A5B7 111 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 ANKRD65E5RJM6 399 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 SLC16A6O15403 523 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 MMP23AO75900 390 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 INMTO95050 263 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 CSN2P05814 226 aa11.99□□□□□ -0.49
VAPA-209ENST00000585042 RPSAP08865 295 aaKnown RBP11.99□□□□□ -0.49
VAPA-209ENST00000585042 PF4V1P10720 104 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms