RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 ANGPTL7O43827 346 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 CLPXO76031 633 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 RPL15P61313 204 aaKnown RBP12.82□□□□□ -0.36
SKA2-209ENST00000583976 IL24Q13007 206 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 IKZF1Q13422 519 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 KISS1Q15726 138 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 NEDD8Q15843 81 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 FAM27D1Q5T7N8 215 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 UBE2UQ5VVX9 321 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 DHRS7BQ6IAN0 325 aaPredicted RBP12.82□□□□□ -0.36
SKA2-209ENST00000583976 CEACAM19Q7Z692 300 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 POC1AQ8NBT0 407 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 PKIBQ9C010 78 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 MTCH1Q9NZJ7 389 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 KAAG1Q9UBP8 84 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 CKLFQ9UBR5 152 aa12.82□□□□□ -0.36
SKA2-209ENST00000583976 NDUFA2O43678 99 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 ALX3O95076 343 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 MAS1P04201 325 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 PGA5P0DJD9 388 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 CALCBP10092 127 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 IGFBP3P17936 291 aaPredicted RBP12.81□□□□□ -0.36
SKA2-209ENST00000583976 MPZP25189 248 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 MAPK3P27361 379 aaPredicted RBP12.81□□□□□ -0.36
SKA2-209ENST00000583976 BDKRB2P30411 391 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 PDZK1IP1Q13113 114 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 SSX1Q16384 188 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 DDI2Q5TDH0 399 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 STUMQ69YW2 141 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 ZNF529Q6P280 563 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 CRIP3Q6Q6R5 217 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 UNQ9370/PRO34162Q6UXP9 181 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 MKXQ8IYA7 352 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 ZSCAN4Q8NAM6 433 aaPredicted RBP12.81□□□□□ -0.36
SKA2-209ENST00000583976 LY6G5BQ8NDX9 201 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 TSPAN14Q8NG11 270 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 FCGR1BQ92637 280 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 CEP19Q96LK0 163 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 GPER1Q99527 375 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 TCF7L1Q9HCS4 588 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 TMEM138Q9NPI0 162 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 NLKQ9UBE8 527 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 VPREB3Q9UKI3 123 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 SF3B6Q9Y3B4 125 aaKnown RBP12.81□□□□□ -0.36
SKA2-209ENST00000583976 KPTNQ9Y664 436 aa12.81□□□□□ -0.36
SKA2-209ENST00000583976 MAGEA13PA6NCF6 341 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 F8VVB4 439 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 F8VWA3 439 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 NXPH2O95156 264 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 CYB5AP00167 134 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 TMEM225BP0DP42 221 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 MUC1P15941 1255 aaPredicted RBP12.8□□□□□ -0.36
SKA2-209ENST00000583976 GABRA5P31644 462 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 GABRA2P47869 451 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 NPBWR2P48146 333 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 ACP7Q6ZNF0 438 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 TMEM91Q6ZNR0 172 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 Q8N7P7 452 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 FAM110DQ8TAY7 271 aaPredicted RBP12.8□□□□□ -0.36
SKA2-209ENST00000583976 THRSPQ92748 146 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 NRIP2Q9BQI9 281 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 PPIL3Q9H2H8 161 aaKnown RBP12.8□□□□□ -0.36
SKA2-209ENST00000583976 CNTD2Q9H8S5 307 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 ELL3Q9HB65 397 aaPredicted RBP12.8□□□□□ -0.36
SKA2-209ENST00000583976 FOXJ3Q9UPW0 622 aa12.8□□□□□ -0.36
SKA2-209ENST00000583976 TET2Q6N021 2002 aaPredicted RBP12.79□□□□□ -0.36
SKA2-209ENST00000583976 A0A087WXM4 84 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 IGKV1-12A0A0C4DH73 117 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 OR2AT4A6NND4 320 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 NPFFO15130 113 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 NOS1APO75052 506 aaPredicted RBP12.79□□□□□ -0.36
SKA2-209ENST00000583976 GPX5O75715 221 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 SC5DO75845 299 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 ECDO95905 644 aaPredicted RBP12.79□□□□□ -0.36
SKA2-209ENST00000583976 IGKV1D-12P01611 117 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 PSG2P11465 335 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 FSTP19883 344 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 BCL3P20749 454 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 GP2P55259 537 aaKnown RBP12.79□□□□□ -0.36
SKA2-209ENST00000583976 FABP5Q01469 135 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 TRAM1Q15629 374 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 GDPGP1Q6ZNW5 385 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 H1FXQ92522 213 aaKnown RBP12.79□□□□□ -0.36
SKA2-209ENST00000583976 FAM192AQ9GZU8 254 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 RASL12Q9NYN1 266 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 OR14J1Q9UGF5 321 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 FAM96BQ9Y3D0 163 aa12.79□□□□□ -0.36
SKA2-209ENST00000583976 RFPL4AA6NLU0 287 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 RFPL4AL1F8VTS6 287 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 CCRL2O00421 344 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 GABRPO00591 440 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 ALDOBP05062 364 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 FBP1P09467 338 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 PSMA1P25786 263 aaKnown RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 SAA4P35542 130 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 ZNF93P35789 620 aaPredicted RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 OR3A4PP47883 348 aa12.78□□□□□ -0.36
SKA2-209ENST00000583976 CEBPDP49716 269 aaPredicted RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 SNU13P55769 128 aaKnown RBP12.78□□□□□ -0.36
SKA2-209ENST00000583976 ZP1P60852 638 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms