RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 PLCL2Q9UPR0 1127 aa3.2□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC17A4Q9Y2C5 497 aa3.2□□□□□ -1.9
SMCHD1-208ENST00000583344 PRELID3BQ9Y3B1 194 aa3.2□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF337Q9Y3M9 751 aa3.2□□□□□ -1.9
SMCHD1-208ENST00000583344 LRRK1Q38SD2 2015 aa3.2□□□□□ -1.9
SMCHD1-208ENST00000583344 CUL9Q8IWT3 2517 aa3.2□□□□□ -1.9
SMCHD1-208ENST00000583344 COL4A2P08572 1712 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TRBV6-7A0A0A0MS04 114 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 A0A0U1RQV5 110 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM218A2RU14 115 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 XKRY2A2RUG3 117 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 GGT3PA6NGU5 568 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR5H14A6NHG9 310 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF98A6NK75 572 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM212A6NML5 194 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 H7C2Y5 167 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC17A2O00624 439 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 PHYHO14832 338 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 MAGEB4O15481 346 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ARPC5O15511 151 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 LRP3O75074 770 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 CTAG2O75638 210 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ATG12O94817 140 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 GYPBP06028 91 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 CD14P08571 375 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR4E1P0C645 316 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC35G6P0C7Q6 338 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ASAH2BP0C7U1 165 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF735P0CB33 412 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 PNMTP11086 282 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 B4GALT1P15291 398 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ALOX5APP20292 161 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 PRDX2P32119 198 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 GABRA3P34903 492 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 DRD3P35462 400 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TNFRSF4P43489 277 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 PPICP45877 212 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 CBX5P45973 191 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 STARP49675 285 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TAS2R19P59542 299 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ACTBP60709 375 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 RPS15P62841 145 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ACTG1P63261 375 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 IGLV3-21P80748 117 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ZFP36L1Q07352 338 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 BIKQ13323 160 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 STK11Q15831 433 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 POM121L1PQ3SYA9 428 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF542PQ5EBM4 170 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 VWA2Q5GFL6 755 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TEX30Q5JUR7 227 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 LY6G6FQ5SQ64 297 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 GLT8D1Q68CQ7 371 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 NCR3LG1Q68D85 454 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 STEAP1BQ6NZ63 245 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 C3orf33Q6P1S2 294 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM205Q6UW68 189 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 FAM159AQ6UWV7 190 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ACOT7LQ6ZUV0 252 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ABHD13Q7L211 337 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 NDUFAF7Q7L592 441 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 FAM122BQ7Z309 247 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 DEFB128Q7Z7B8 93 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC25A42Q86VD7 318 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 CATSPERDQ86XM0 798 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 LYPD6Q86Y78 171 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TDHQ8IZJ6 230 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ZNF433Q8N7K0 673 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 COX18Q8N8Q8 333 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 SDR9C7Q8NEX9 313 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 NUP37Q8NFH4 326 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 BPIFCQ8NFQ6 507 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR4E2Q8NGC2 313 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR5M1Q8NGP8 315 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR10K1Q8NGX5 313 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR2G2Q8NGZ5 317 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR4K13Q8NH42 304 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 OR52N5Q8NH56 324 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 SEH1LQ96EE3 360 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 APOOQ9BUR5 198 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ALG12Q9BV10 488 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 C1QTNF6Q9BXI9 259 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 NKX6-2Q9C056 277 aaPredicted RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 CHST6Q9GZX3 395 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 PRO3102Q9H379 93 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 XKR8Q9H6D3 395 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 SLC2A8Q9NY64 477 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 COA4Q9NYJ1 87 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 MRM2Q9UI43 246 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ATPIF1Q9UII2 106 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TNFSF18Q9UNG2 199 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 ERVK-19Q9WJR5 959 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 CARHSP1Q9Y2V2 147 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 MRPS2Q9Y399 296 aaKnown RBP3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 TMEM14AQ9Y6G1 99 aa3.19□□□□□ -1.9
SMCHD1-208ENST00000583344 MUC22E2RYF6 1773 aaPredicted RBP3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 DNAH12Q6ZR08 3092 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 FXYD6-FXYD2A0A087WZ82 144 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 A0A0B4J2A0 478 aa3.18□□□□□ -1.9
SMCHD1-208ENST00000583344 LOC390937A0A1W2PQ73 354 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms