RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 CRISP1P54107 249 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 DCTN2Q13561 401 aaKnown RBP12.78□□□□□ -0.36
SREBF1-221ENST00000583080 NKAPLQ5M9Q1 402 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 OR52W1Q6IF63 320 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 MEPCEQ7L2J0 689 aaKnown RBP12.78□□□□□ -0.36
SREBF1-221ENST00000583080 CATSPERDQ86XM0 798 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 ENTHD1Q8IYW4 607 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 FAM58AQ8N1B3 248 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 ASB9Q96DX5 294 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 BORCS8Q96FH0 119 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 P2RX4Q99571 388 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 TBX5Q99593 518 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 MCRIP2Q9BUT9 160 aaKnown RBP12.78□□□□□ -0.36
SREBF1-221ENST00000583080 GAL3ST2Q9H3Q3 398 aa12.78□□□□□ -0.36
SREBF1-221ENST00000583080 TRGV10A0A0A0MS01 117 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 ZNF670-ZNF695F2Z2N8 137 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 BUB1B-PAK6H3BSN5 160 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 M0QZK8 103 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 DCTN3O75935 186 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 GLIPR1P48060 266 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 DGCR2P98153 550 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 RBM39Q14498 530 aaKnown RBP12.77□□□□□ -0.37
SREBF1-221ENST00000583080 ZNF146Q15072 292 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 Q8IYB0 196 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 YIPF7Q8N8F6 280 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 KLHL30-AS1Q8NEE0 82 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 CLN6Q9NWW5 311 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 LINC00527Q9UJ94 153 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 PCDHGB5Q9Y5G0 923 aa12.77□□□□□ -0.37
SREBF1-221ENST00000583080 IGKV1-9A0A0C4DH69 117 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 OR2H2O95918 312 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 SNRNP70P08621 437 aaKnown RBP12.76□□□□□ -0.37
SREBF1-221ENST00000583080 CEACAM3P40198 252 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 MYCNOSP40205 109 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 LUMP51884 338 aaPredicted RBP12.76□□□□□ -0.37
SREBF1-221ENST00000583080 MNAT1P51948 309 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 ACTR3P61158 418 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 AESQ08117 197 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 PTGES3Q15185 160 aaKnown RBP12.76□□□□□ -0.37
SREBF1-221ENST00000583080 SPIN3Q5JUX0 258 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 AADACL4Q5VUY2 407 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 PRR25Q96S07 402 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 MNTQ99583 582 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 ING3Q9NXR8 418 aa12.76□□□□□ -0.37
SREBF1-221ENST00000583080 LSM4Q9Y4Z0 139 aaKnown RBP12.76□□□□□ -0.37
SREBF1-221ENST00000583080 IGKV1-12A0A0C4DH73 117 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 LOC107986453A0A1B0GWG9 222 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 ODAMA1E959 279 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 TOR1AO14656 332 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 IGKV1D-12P01611 117 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 KRT8P05787 483 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 NHLRC4P0CG21 123 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-221ENST00000583080 LMO1P25800 156 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 PTGFRP43088 359 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 PRSS35Q8N3Z0 413 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 TCEANCQ8N8B7 351 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 C5orf56Q8N8D9 126 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 OR56B4Q8NH76 319 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 CORO2AQ92828 525 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 ADAT3Q96EY9 351 aaPredicted RBP12.75□□□□□ -0.37
SREBF1-221ENST00000583080 COQ2Q96H96 371 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 HMG20AQ9NP66 347 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 EXOSC4Q9NPD3 245 aaKnown RBP12.75□□□□□ -0.37
SREBF1-221ENST00000583080 TAS2R3Q9NYW6 316 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 GSTK1Q9Y2Q3 226 aa12.75□□□□□ -0.37
SREBF1-221ENST00000583080 HUWE1Q7Z6Z7 4374 aaKnown RBP12.74□□□□□ -0.37
SREBF1-221ENST00000583080 A0A087X0M5 115 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 A0A1B0GX30 115 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A18PA6NE21 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A16PA6NEW6 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A20PA6NIJ5 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A9PA6NNJ1 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A12PA8MX19 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A5PA8MXJ8 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 APOL3O95236 402 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A15PP0C7V4 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A13PP0C7W8 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A14PP0C7W9 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAM90A24PP0C7X0 464 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 EPHA2P29317 976 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 MNDAP41218 407 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 KIR3DL2P43630 455 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 RBP2P50120 134 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 DAPP51397 102 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 ATP1B3P54709 279 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 RAB25P57735 213 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 CDC42P60953 191 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 KPNB1Q14974 876 aaKnown RBP12.74□□□□□ -0.37
SREBF1-221ENST00000583080 C17orf58Q2M2W7 97 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 NXNL2Q5VZ03 156 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 CCDC144NLQ6NUI1 221 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 FAHD1Q6P587 224 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 UNQ9370/PRO34162Q6UXP9 181 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 RDH10Q8IZV5 341 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 CHPT1Q8WUD6 406 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 TOMM40LQ969M1 308 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 RFT1Q96AA3 541 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 CREB3L1Q96BA8 519 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 RAX2Q96IS3 184 aa12.74□□□□□ -0.37
SREBF1-221ENST00000583080 NSL1Q96IY1 281 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms