RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 TMEM59Q9BXS4 323 aa7.31□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SLIRPQ9GZT3 109 aaKnown RBP7.31□□□□□ -1.24
PDLIM1P3-201ENST00000582370 NXF2Q9GZY0 626 aaKnown RBP7.31□□□□□ -1.24
PDLIM1P3-201ENST00000582370 NAA50Q9GZZ1 169 aaKnown RBP7.31□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ABCG5Q9H222 651 aa7.31□□□□□ -1.24
PDLIM1P3-201ENST00000582370 IFT22Q9H7X7 185 aa7.31□□□□□ -1.24
PDLIM1P3-201ENST00000582370 LOC105371242A0A075B767 164 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 hCG_1807616A0A1W2PRN6 198 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SRRM5B3KS81 715 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CLDN25C9JDP6 229 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CDIPTO14735 213 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SH2D1BO14796 132 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 GPR37O15354 613 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CA11O75493 328 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CLPXO76031 633 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 NXPH2O95156 264 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 LHBP01229 141 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ANOS1P23352 680 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 GLRA1P23415 457 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 MAGEB1P43366 347 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 POU3F4P49335 361 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ERVK11-1P61568 191 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CCL8P80075 99 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 MRPS10P82664 201 aaKnown RBP7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ZNF146Q15072 292 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 P2RY14Q15391 338 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 MSMPQ1L6U9 139 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 C2orf76Q3KRA6 126 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ALKBH6Q3KRA9 238 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SPANXN2Q5MJ10 180 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FAHD2BQ6P2I3 314 aaPredicted RBP7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 WDR82Q6UXN9 313 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CALHM1Q8IU99 346 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FAM58AQ8N1B3 248 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 NPRL2Q8WTW4 380 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ITLN1Q8WWA0 313 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 S100ZQ8WXG8 99 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 GTF3AQ92664 365 aaKnown RBP7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SLC25A28Q96A46 364 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FAHD2AQ96GK7 314 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 WDFY2Q96P53 400 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 TM2D1Q9BX74 207 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ELL3Q9HB65 397 aaPredicted RBP7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 LPAR2Q9HBW0 351 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 HES4Q9HCC6 221 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 TMEM106BQ9NUM4 274 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 C1orf123Q9NWV4 160 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ING4Q9UNL4 249 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 PPIAL4AQ9Y536 164 aa7.3□□□□□ -1.24
PDLIM1P3-201ENST00000582370 IGKV1-27A0A075B6S5 117 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SHISA3A0PJX4 238 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FUOMA2VDF0 154 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 TMEM14DPA8MWL7 114 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 H0YL77 283 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 RGS5O15539 181 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CRTAPO75718 401 aaPredicted RBP7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 NCR1O76036 304 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 MGMTP16455 207 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 PRTN3P24158 256 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FPR2P25090 351 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 MDH2P40926 338 aaKnown RBP7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 OR3A4PP47883 348 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 OR10A3P58181 314 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 RPS27AP62979 156 aaKnown RBP7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ZNF45Q02386 682 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CNPY1Q3B7I2 92 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SLC22A6Q4U2R8 563 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 TMEM155Q4W5P6 130 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 TMEM255AQ5JRV8 349 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 HES5Q5TA89 166 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 TEX36Q5VZQ5 186 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 RBMS3Q6XE24 437 aaKnown RBP7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 MOGAT3Q86VF5 341 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 ZNF561Q8N587 486 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FAM89BQ8N5H3 189 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 SPICQ8N5J4 248 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 OR4D6Q8NGJ1 314 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 OR5D13Q8NGL4 314 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 CLDND2Q8NHS1 167 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 NANPQ8TBE9 248 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 LRRC29Q8WV35 223 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FAM46BQ96A09 425 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 MED30Q96HR3 178 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 DMRTB1Q96MA1 342 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 GAL3ST1Q99999 423 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 DCUN1D5Q9BTE7 237 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 C6orf62Q9GZU0 229 aaPredicted RBP7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 FAM234AQ9H0X4 552 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 RIMS4Q9H426 269 aaPredicted RBP7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 RNF167Q9H6Y7 350 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 HMG20AQ9NP66 347 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 RAB9BQ9NP90 201 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 RHBDL2Q9NX52 303 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 TREM2Q9NZC2 230 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 DNAJB11Q9UBS4 358 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 HSF4Q9ULV5 492 aa7.29□□□□□ -1.24
PDLIM1P3-201ENST00000582370 BIRC6Q9NR09 4857 aa7.28□□□□□ -1.24
PDLIM1P3-201ENST00000582370 PPIAL4EA0A075B759 164 aa7.28□□□□□ -1.24
PDLIM1P3-201ENST00000582370 A0A0G2JMP0 313 aa7.28□□□□□ -1.24
PDLIM1P3-201ENST00000582370 A0A0X1KG70 313 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms