RNA–Protein interactions for RNA: ENST00000579061.5

SS18-212, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 646 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-212ENST00000579061 GDPGP1Q6ZNW5 385 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 RNF144BQ7Z419 303 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 PNKDQ8N490 385 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 OR5D18Q8NGL1 313 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 OR4F5Q8NH21 305 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 OR5R1Q8NH85 324 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 TFAP2CQ92754 450 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 TMEM106AQ96A25 262 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 MEGF9Q9H1U4 602 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 C1RLQ9NZP8 487 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 CLEC2DQ9UHP7 191 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 PSORS1C1Q9UIG5 152 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 LINC00312Q9Y6C7 94 aa12.1□□□□□ -0.47
SS18-212ENST00000579061 SIRT4Q9Y6E7 314 aaPredicted RBP12.1□□□□□ -0.47
SS18-212ENST00000579061 FUOMA2VDF0 154 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 GPR137BO60478 399 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 OR2H2O95918 312 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 LALBAP00709 142 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 TMEM225BP0DP42 221 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 GABRR1P24046 479 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 DUSP1P28562 367 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 OR3A1P47881 315 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 SOX2P48431 317 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 MTNR1BP49286 362 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 TAS2R43P59537 309 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 TAF9Q16594 264 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 AANATQ16613 207 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 ELP2Q6IA86 826 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 ASPHD2Q6ICH7 369 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 CHST4Q8NCG5 386 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 OR4S1Q8NGB4 309 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 SGMS2Q8NHU3 365 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 ZNF714Q96N38 554 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 SLITRK2Q9H156 845 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 BEX1Q9HBH7 125 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 VPREB3Q9UKI3 123 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 GSTK1Q9Y2Q3 226 aa12.09□□□□□ -0.47
SS18-212ENST00000579061 TRBV5-5A0A0J9YX44 114 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 XPNPEP2O43895 674 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 GPX5O75715 221 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 CSN2P05814 226 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 IGHV1-8P0DP01 117 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 MDKP21741 143 aaPredicted RBP12.08□□□□□ -0.48
SS18-212ENST00000579061 SNU13P55769 128 aaKnown RBP12.08□□□□□ -0.48
SS18-212ENST00000579061 RAG2P55895 527 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 LGALS4P56470 323 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 EDDM3AQ14507 147 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 YIF1BQ5BJH7 314 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 Q6P435 159 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 ASCL4Q6XD76 172 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 TCF23Q7RTU1 214 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 STX19Q8N4C7 294 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 Q8NFD4 153 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 OR51A2Q8NGJ7 313 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 OR13D1Q8NGV5 346 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 GHSRQ92847 366 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 AJUBAQ96IF1 538 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 GPER1Q99527 375 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 CHST6Q9GZX3 395 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 TMEM138Q9NPI0 162 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 FKBP14Q9NWM8 211 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 TAS2R4Q9NYW5 299 aa12.08□□□□□ -0.48
SS18-212ENST00000579061 NKX1-2Q9UD57 310 aaPredicted RBP12.08□□□□□ -0.48
SS18-212ENST00000579061 SIRPB1O00241 398 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 GABRPO00591 440 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 CD1AP06126 327 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 CALCBP10092 127 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 P2RX3P56373 397 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 PPP3R1P63098 170 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 RELBQ01201 579 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 Q499Y3 187 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 RNLSQ5VYX0 342 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 AHSA2Q719I0 299 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 BPIFB6Q8NFQ5 453 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 OR11H6Q8NGC7 330 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 OR51T1Q8NGJ9 327 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 CORO2AQ92828 525 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 PGLYRP3Q96LB9 341 aa12.07□□□□□ -0.48
SS18-212ENST00000579061 UBE2J1Q9Y385 318 aaPredicted RBP12.07□□□□□ -0.48
SS18-212ENST00000579061 TBL2Q9Y4P3 447 aaKnown RBP12.07□□□□□ -0.48
SS18-212ENST00000579061 A0A0G2JK05 382 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 CLPSL1A2RUU4 121 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 FAM90A8PA6NJQ4 464 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 ODF3BA8MYP8 253 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 MYL12BO14950 172 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 ZNF44P15621 663 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 IGFBP3P17936 291 aaPredicted RBP12.06□□□□□ -0.48
SS18-212ENST00000579061 OMGP23515 440 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 COX7A1P24310 79 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 C21orf33P30042 268 aaPredicted RBP12.06□□□□□ -0.48
SS18-212ENST00000579061 BDKRB2P30411 391 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 TGFBR2P37173 567 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 WNT4P56705 351 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 RPS11P62280 158 aaKnown RBP eCLIP12.06□□□□□ -0.48
SS18-212ENST00000579061 IL13RA2Q14627 380 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 LRRC75BQ2VPJ9 315 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 OLFML2AQ68BL7 652 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 ZNF626Q68DY1 528 aa12.06□□□□□ -0.48
SS18-212ENST00000579061 ZNF782Q6ZMW2 699 aaPredicted RBP12.06□□□□□ -0.48
SS18-212ENST00000579061 SATL1Q86VE3 508 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms