RNA–Protein interactions for RNA: ENST00000578595.1

SS18-209, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 406 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-209ENST00000578595 ING3Q9NXR8 418 aa16■□□□□ 0.15
SS18-209ENST00000578595 A0A0U1RQK1 487 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 RNASEK-C17orf49H0YIS7 233 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 ZNF737O75373 536 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 HTR3BO95264 441 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 OR2H2O95918 312 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 MAS1P04201 325 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 HSMCR30P0CW71 290 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 TMEM200BQ69YZ2 307 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 ZNF782Q6ZMW2 699 aaPredicted RBP15.99■□□□□ 0.15
SS18-209ENST00000578595 TRAPPC6BQ86SZ2 158 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 PNKDQ8N490 385 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 FAM216AQ8WUB2 273 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 GCDHQ92947 438 aaPredicted RBP15.99■□□□□ 0.15
SS18-209ENST00000578595 SLC25A28Q96A46 364 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 OR5M11Q96RB7 305 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 TMED9Q9BVK6 235 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 CDCA4Q9BXL8 241 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 RAB26Q9ULW5 256 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 ING4Q9UNL4 249 aa15.99■□□□□ 0.15
SS18-209ENST00000578595 NPFFO15130 113 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 HOXA3O43365 443 aaPredicted RBP15.98■□□□□ 0.15
SS18-209ENST00000578595 PAHP00439 452 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 PRTN3P24158 256 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 COX7A1P24310 79 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 MAPK3P27361 379 aaPredicted RBP15.98■□□□□ 0.15
SS18-209ENST00000578595 MTNR1BP49286 362 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 SLC35A2P78381 396 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 ZNF146Q15072 292 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 SPHARQ15513 63 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 CRIP3Q6Q6R5 217 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 JAGN1Q8N5M9 183 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 OR4S1Q8NGB4 309 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 ZNF184Q99676 751 aaPredicted RBP15.98■□□□□ 0.15
SS18-209ENST00000578595 PPA2Q9H2U2 334 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 ZMAT3Q9HA38 289 aaKnown RBP15.98■□□□□ 0.15
SS18-209ENST00000578595 RHOFQ9HBH0 211 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 BLOC1S6Q9UL45 172 aa15.98■□□□□ 0.15
SS18-209ENST00000578595 hADV38S2A0JD32 116 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 MEIOCA2RUB1 952 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 HSPB6O14558 160 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 DEGS1O15121 323 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 PSPNO60542 156 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 CDRT1O95170 752 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 CSTBP04080 98 aaKnown RBP15.97■□□□□ 0.15
SS18-209ENST00000578595 TGFBR2P37173 567 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 BMXP51813 675 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 ERVFRD-1P60508 538 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 RPS11P62280 158 aaKnown RBP eCLIP15.97■□□□□ 0.15
SS18-209ENST00000578595 BDH1Q02338 343 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 DOC2BQ14184 412 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 ZNF529Q6P280 563 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 C17orf107Q6ZR85 190 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 C1orf122Q6ZSJ8 110 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 PXT1Q8NFP0 134 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 THRSPQ92748 146 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 UFD1Q92890 307 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 METTL9Q9H1A3 318 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 Q9H521 79 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 NOX4Q9NPH5 578 aa15.97■□□□□ 0.15
SS18-209ENST00000578595 TRAV8-7A0A075B6U6 113 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 MAGEA13PA6NCF6 341 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 MGST3O14880 152 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 ALDOBP05062 364 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 FSTP19883 344 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 SERPINA2P20848 420 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 SAA4P35542 130 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 PTGFRP43088 359 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 OR3A1P47881 315 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 ATXN7L3Q14CW9 347 aaPredicted RBP15.96■□□□□ 0.15
SS18-209ENST00000578595 SLC9A3R2Q15599 337 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 RNLSQ5VYX0 342 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 METAP1DQ6UB28 335 aaPredicted RBP15.96■□□□□ 0.15
SS18-209ENST00000578595 C12orf54Q6X4T0 127 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 PIP4P2Q8N4L2 257 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 C1orf147Q96MC9 270 aaPredicted RBP15.96■□□□□ 0.15
SS18-209ENST00000578595 ZNF714Q96N38 554 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 DERL3Q96Q80 235 aa15.96■□□□□ 0.15
SS18-209ENST00000578595 SF3B6Q9Y3B4 125 aaKnown RBP15.96■□□□□ 0.15
SS18-209ENST00000578595 RRP15Q9Y3B9 282 aaKnown RBP15.96■□□□□ 0.15
SS18-209ENST00000578595 FBP1P09467 338 aa15.95■□□□□ 0.14
SS18-209ENST00000578595 IGFBP3P17936 291 aaPredicted RBP15.95■□□□□ 0.14
SS18-209ENST00000578595 CRHBPP24387 322 aa15.95■□□□□ 0.14
SS18-209ENST00000578595 PIGYQ3MUY2 71 aa15.95■□□□□ 0.14
SS18-209ENST00000578595 RBM48Q5RL73 367 aaKnown RBP15.95■□□□□ 0.14
SS18-209ENST00000578595 MUL1Q969V5 352 aa15.95■□□□□ 0.14
SS18-209ENST00000578595 HEXA-AS1Q9H8Q6 139 aa15.95■□□□□ 0.14
SS18-209ENST00000578595 TRBV5-7A0A0A0MS05 114 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 FUOMA2VDF0 154 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 BTBD17A6NE02 478 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 CD1AP06126 327 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 MELTFP08582 738 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 ZNF728P0DKX0 622 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 MAP2K4P45985 399 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 UBE2E1P51965 193 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 P2RX3P56373 397 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 MEF2CQ06413 473 aaPredicted RBP15.94■□□□□ 0.14
SS18-209ENST00000578595 AESQ08117 197 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 ACSM1Q08AH1 577 aa15.94■□□□□ 0.14
SS18-209ENST00000578595 SLC22A6Q4U2R8 563 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms