RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 OR8B3Q8NGG8 313 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 KCTD12Q96CX2 325 aaKnown RBP10.12□□□□□ -0.79
IFT20-207ENST00000578547 OR8B2Q96RD0 313 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 URM1Q9BTM9 101 aaKnown RBP10.12□□□□□ -0.79
IFT20-207ENST00000578547 MRI1Q9BV20 369 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 CHST6Q9GZX3 395 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 LPAR5Q9H1C0 372 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 ATG5Q9H1Y0 275 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 ZNF665Q9H7R5 613 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 CTSZQ9UBR2 303 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 FBLN5Q9UBX5 448 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 ETV7Q9Y603 341 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 VPS13CQ709C8 3753 aa10.12□□□□□ -0.79
IFT20-207ENST00000578547 A0A0A6YYD4 124 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 RGS5O15539 181 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 NDUFA2O43678 99 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 TMEM127O75204 238 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 IGHV2-5P01817 119 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 CHRM2P08172 466 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 RAB6AP20340 208 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 IL2RGP31785 369 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 PITPNBP48739 271 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 VEGFCP49767 419 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 SEC61A1P61619 476 aaKnown RBP10.11□□□□□ -0.79
IFT20-207ENST00000578547 MPV17LQ2QL34 196 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 PAN3Q58A45 887 aaKnown RBP10.11□□□□□ -0.79
IFT20-207ENST00000578547 Q6P435 159 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 MZT2AQ6P582 158 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 BRICD5Q6PL45 260 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 ZNF788Q6ZQV5 615 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 LINC00596Q86U02 117 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 BIVMQ86UB2 503 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 FGFRL1Q8N441 504 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 MCFD2Q8NI22 146 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 NEK7Q8TDX7 302 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 ACOT12Q8WYK0 555 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 ST8SIA4Q92187 359 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 RAB39BQ96DA2 213 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 SLC25A38Q96DW6 304 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 NEIL1Q96FI4 390 aaPredicted RBP10.11□□□□□ -0.79
IFT20-207ENST00000578547 SDSLQ96GA7 329 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 REG4Q9BYZ8 158 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 C6orf62Q9GZU0 229 aaPredicted RBP10.11□□□□□ -0.79
IFT20-207ENST00000578547 PPA2Q9H2U2 334 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 PATZ1Q9HBE1 687 aaKnown RBP10.11□□□□□ -0.79
IFT20-207ENST00000578547 RHBDL2Q9NX52 303 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 ING3Q9NXR8 418 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 MIOXQ9UGB7 285 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 SPATA2Q9UM82 520 aa10.11□□□□□ -0.79
IFT20-207ENST00000578547 A0A096LNT2 108 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 TMEM82A0PJX8 343 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 SLC33A1O00400 549 aaPredicted RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 DVL1O14640 695 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 TNFRSF13BO14836 293 aaPredicted RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 SIGLEC5O15389 551 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 SOCS1O15524 211 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 NDUFB3O43676 98 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 PSPNO60542 156 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 HPGDSO60760 199 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 HEXAP06865 529 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 NDUFB7P17568 137 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 BLVRBP30043 206 aaPredicted RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 SCAND1P57086 179 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 LMO4P61968 165 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 EDDM3AQ14507 147 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 ATXN7L3Q14CW9 347 aaPredicted RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 LRRC10Q5BKY1 277 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 UBE2NLQ5JXB2 153 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 ATPAF1Q5TC12 328 aaPredicted RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 RAB12Q6IQ22 244 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 SPNS3Q6ZMD2 512 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 RTN4RL2Q86UN3 420 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 CIARTQ8N365 385 aaPredicted RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 ZNF561Q8N587 486 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 CHST4Q8NCG5 386 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 H1FXQ92522 213 aaKnown RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 PTX4Q96A99 478 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 PHF21AQ96BD5 680 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 MED30Q96HR3 178 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 NEDD4LQ96PU5 975 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 TM2D1Q9BX74 207 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 SLIRPQ9GZT3 109 aaKnown RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 DNTTIP1Q9H147 329 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 SLC25A10Q9UBX3 287 aaPredicted RBP10.1□□□□□ -0.79
IFT20-207ENST00000578547 MAB21L2Q9Y586 359 aa10.1□□□□□ -0.79
IFT20-207ENST00000578547 A0A075B6Q4 140 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 TRAV24A0A0B4J272 114 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 METTL21EPA6NDL7 271 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A10PA6NDY2 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A18PA6NE21 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A16PA6NEW6 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A20PA6NIJ5 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A8PA6NJQ4 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A7PA6NKC0 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A22PA8MWA6 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A12PA8MX19 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A5PA8MXJ8 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM90A23PA8MXZ1 464 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM25AB3EWG3 89 aa10.09□□□□□ -0.79
IFT20-207ENST00000578547 FAM25CB3EWG5 89 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms