RNA–Protein interactions for RNA: ENST00000577730.5

CDH8-205, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 8,009 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-205ENST00000577730 SRSF10O75494 262 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 NPPBP16860 134 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 CCR5P51681 352 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 YBX1P67809 324 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 SRSF9Q13242 221 aaKnown RBP eCLIP3.92□□□□□ -1.78
CDH8-205ENST00000577730 DMRTC2Q8IXT2 367 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 POC1AQ8NBT0 407 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 OR8A1Q8NGG7 326 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 SOCS4Q8WXH5 440 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 MARS2Q96GW9 593 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 ZNF385AQ96PM9 386 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 SOSTQ9BQB4 213 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 ZNF665Q9H7R5 613 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 HES4Q9HCC6 221 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 TMEM30AQ9NV96 361 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 AURKAIP1Q9NWT8 199 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 APOBEC3BQ9UH17 382 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 PIK3C2BO00750 1634 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 TMED7-TICAM2A0A0A6YYA0 188 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 SERTM1A2A2V5 107 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 BLACEA4D250 179 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 RER1O15258 196 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 CDC14BO60729 498 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 SLCO2B1O94956 709 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 IL2RAP01589 272 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 ERGP11308 486 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 OTX1P32242 354 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 EFNB2P52799 333 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 FAM69BQ5VUD6 431 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 HOGA1Q86XE5 327 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 OR52E5Q8NH55 327 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 C20orf144Q9BQM9 153 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 RSPO3Q9BXY4 272 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 ULBP2Q9BZM5 246 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 FNDC4Q9H6D8 234 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 ST6GALNAC2Q9UJ37 374 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 FOXD3Q9UJU5 478 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 GPR132Q9UNW8 380 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 IGHV1-69-2A0A0G2JMI3 117 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 H3BML4 177 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 TSPAN13O95857 204 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 SCGB1A1P11684 91 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 UBE2NP61088 152 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 ZNF750Q32MQ0 723 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 SLC36A1Q7Z2H8 476 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 STXBP6Q8NFX7 210 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 GEMIN7Q9H840 131 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 SDF2L1Q9HCN8 221 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.92□□□□□ -1.78
CDH8-205ENST00000577730 COX11Q9Y6N1 276 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 COL5A2P05997 1499 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 TRBV24-1A0A075B6N3 115 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 LOC107984156A0A0G2JMH3 177 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 M0QZ24 198 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 RBFOX2O43251 390 aaKnown RBP eCLIP3.92□□□□□ -1.78
CDH8-205ENST00000577730 SLC35E2P0CK97 266 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 GZMBP10144 247 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 RPL7P18124 248 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 ZFP36L2P47974 494 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 HIST1H1AQ02539 215 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 FUT5Q11128 374 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 C1orf140Q5VVS0 124 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 ZFAND6Q6FIF0 208 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 ARL17AQ8IVW1 177 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 CMTM8Q8IZV2 173 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 PTX4Q96A99 478 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 SDF2Q99470 211 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 TMEM167BQ9NRX6 74 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 C19orf53Q9UNZ5 99 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 HDGFL3Q9Y3E1 203 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 A0A087WUJ7 227 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 F8VVB4 439 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 F8VWA3 439 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 MPZP25189 248 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 HOXD9P28356 352 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 FLT3LGP49771 235 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 RAB9AP51151 201 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 ATP5IP56385 69 aaPredicted RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 PCBD1P61457 104 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 MRPL58Q14197 206 aaKnown RBP3.92□□□□□ -1.78
CDH8-205ENST00000577730 ZNF788Q6ZQV5 615 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 HSD11B1LQ7Z5J1 315 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 RTN4RL2Q86UN3 420 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 OR8B2Q96RD0 313 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 FAM117AQ9C073 453 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 HCFC1R1Q9NWW0 138 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 ANKRD10Q9NXR5 420 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 IGKV6D-21A0A0A0MT36 114 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 TMEM262E9PQX1 116 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 TMEM250H0YL14 139 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 CHST1O43916 411 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 CER1O95813 267 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 CXCL1P09341 107 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 VDAC1P21796 283 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 MPLP40238 635 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 SEC11AP67812 179 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 DUSP5Q16690 384 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 ABHD17CQ6PCB6 329 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 CXCL17Q6UXB2 119 aa3.92□□□□□ -1.78
CDH8-205ENST00000577730 MED25Q71SY5 747 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 140 ms