RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 P2RY4P51582 365 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 PABPC1L2AQ5JQF8 200 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 FAM209BQ5JX69 171 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 PRAMEF5Q5TYX0 476 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 PRAMEF6Q5VXH4 476 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 HLA-CQ95604 372 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 ADAM19Q9H013 955 aa15.73■□□□□ 0.11
ATPAF1-214ENST00000576409 FUT6P51993 359 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 DCAF12Q5T6F0 453 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 CA5BP1Q8WTZ4 195 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 SPSB1Q96BD6 273 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 IP6K3Q96PC2 410 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 EDEM2Q9BV94 578 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 PDCD6O75340 191 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 MMP9P14780 707 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 KLK2P20151 261 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF574Q6ZN55 896 aaPredicted RBP15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 AP1S3Q96PC3 154 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 TXN2Q99757 166 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 C5orf66Q9H5L9 145 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 GPR132Q9UNW8 380 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 A0A1W2PNV4 684 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 A6NCN8 305 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 A8MXK9 166 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 CLDN34H7C241 214 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 PTCRAQ6ISU1 281 aaPredicted RBP15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 ZDHHC23Q8IYP9 409 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 PPP1R35Q8TAP8 253 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF721Q8TF20 911 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 UHRF2Q96PU4 802 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 PLCE1Q9P212 2302 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 GABRA4P48169 554 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 DLK1P80370 383 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 RASL10BQ96S79 203 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 OR51I2Q9H344 312 aa15.72■□□□□ 0.11
ATPAF1-214ENST00000576409 RNF212BA8MTL3 300 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 DEFB108AA8MXU0 73 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 H3BQ15 152 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 TERTO14746 1132 aaKnown RBP15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 DXOO77932 396 aaKnown RBP15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 CTSDP07339 412 aaPredicted RBP15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 DHRS11Q6UWP2 260 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 MEGF10Q96KG7 1140 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 SLC26A1Q9H2B4 701 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 CCL28Q9NRJ3 127 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 ZMAT5Q9UDW3 170 aaKnown RBP15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 FANCMQ8IYD8 2048 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 CADP27708 2225 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 ATP6V0CP27449 155 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 SUMO3P55854 103 aaPredicted RBP15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 ZNF90Q03938 601 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 MTCH2Q9Y6C9 303 aa15.71■□□□□ 0.11
ATPAF1-214ENST00000576409 GLULP15104 373 aa15.71■□□□□ 0.1
ATPAF1-214ENST00000576409 NOVA1P51513 510 aaKnown RBP15.71■□□□□ 0.1
ATPAF1-214ENST00000576409 INTS1Q8N201 2190 aaKnown RBP15.71■□□□□ 0.1
ATPAF1-214ENST00000576409 C17orf112F2Z3M2 114 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 MFNGO00587 321 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 IGHV4-34P06331 123 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 CTXN2P0C2S0 81 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 EXT1Q16394 746 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 TBC1D26Q86UD7 250 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 HOGA1Q86XE5 327 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 GFI1Q99684 422 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 SRSF3P84103 164 aaKnown RBP15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 LIAT1Q6ZQX7 453 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 GAPTQ8N292 157 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 ZNF383Q8NA42 475 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 OR1K1Q8NGR3 316 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 IFI44Q8TCB0 444 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 GPX7Q96SL4 187 aaPredicted RBP15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 RYDENQ9NUL5 291 aaKnown RBP15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 PLA2G3Q9NZ20 509 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 LHX6Q9UPM6 363 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 TRAV14DV4A0A0A6YYC5 116 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 CBR3O75828 277 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 PPP1CCP36873 323 aaKnown RBP15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 RPL29P47914 159 aaKnown RBP15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 DHODHQ02127 395 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 SLC35G3Q8N808 338 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 WNT16Q9UBV4 365 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 HEATR5AQ86XA9 2040 aa15.7■□□□□ 0.1
ATPAF1-214ENST00000576409 IGKV1D-43A0A0B4J1Z2 117 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 CD1AP06126 327 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 CA6P23280 308 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 ENDOGQ14249 297 aaKnown RBP15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 MYPOPQ86VE0 399 aaPredicted RBP15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 IGHV1OR15-9A0A0B4J2B8 117 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 MAP1LC3B2A6NCE7 125 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 AQP7P3A6NL99 342 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 OR10V1Q8NGI7 309 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 MAP1LC3BQ9GZQ8 125 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 PPYP01298 95 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 HLA-DRB3P79483 266 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 EWSR1Q01844 656 aaKnown RBP eCLIP15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 ROM1Q03395 351 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 HLA-BQ31612 363 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 OR6X1Q8NH79 312 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 GPR27Q9NS67 375 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 DOCK10Q96BY6 2186 aa15.69■□□□□ 0.1
ATPAF1-214ENST00000576409 PSME4Q14997 1843 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms