RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 GRK1Q15835 563 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 ELP2Q6IA86 826 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 PIP4P2Q8N4L2 257 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 THRSPQ92748 146 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 GCDHQ92947 438 aaPredicted RBP19.25■□□□□ 0.67
SNF8-217ENST00000576353 DUSP21Q9H596 190 aa19.25■□□□□ 0.67
SNF8-217ENST00000576353 SF3B6Q9Y3B4 125 aaKnown RBP19.25■□□□□ 0.67
SNF8-217ENST00000576353 MGST3O14880 152 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 NPFFO15130 113 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 HOXA3O43365 443 aaPredicted RBP19.24■□□□□ 0.67
SNF8-217ENST00000576353 PSPNO60542 156 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 RNASE1P07998 156 aaKnown RBP19.24■□□□□ 0.67
SNF8-217ENST00000576353 IGFBP3P17936 291 aaPredicted RBP19.24■□□□□ 0.67
SNF8-217ENST00000576353 ZNF93P35789 620 aaPredicted RBP19.24■□□□□ 0.67
SNF8-217ENST00000576353 PTGFRP43088 359 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 EDDM3AQ14507 147 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 SPHARQ15513 63 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 DDI2Q5TDH0 399 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 CHST4Q8NCG5 386 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 OR14A2Q96R54 314 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 FAM192AQ9GZU8 254 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 HEXA-AS1Q9H8Q6 139 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 PAK1IP1Q9NWT1 392 aaPredicted RBP19.24■□□□□ 0.67
SNF8-217ENST00000576353 RAB26Q9ULW5 256 aa19.24■□□□□ 0.67
SNF8-217ENST00000576353 TRBV5-7A0A0A0MS05 114 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 A0A0U1RQK1 487 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 hADV38S2A0JD32 116 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 SIRPB1O00241 398 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 OR2H2O95918 312 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 LMO1P25800 156 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 TGFBR2P37173 567 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 VHLP40337 213 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 DLX1P56177 255 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 PRB3Q04118 309 aaPredicted RBP19.23■□□□□ 0.67
SNF8-217ENST00000576353 SCN1BQ07699 218 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 KLRD1Q13241 179 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 ZNF273Q14593 569 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 RSU1Q15404 277 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 ASCL4Q6XD76 172 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 OR4S1Q8NGB4 309 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 ORAI1Q96D31 301 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 CHST6Q9GZX3 395 aa19.23■□□□□ 0.67
SNF8-217ENST00000576353 TMEM89A2RUT3 159 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 FUOMA2VDF0 154 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 DEGS1O15121 323 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 RGS10O43665 173 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 MELTFP08582 738 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 ZNF728P0DKX0 622 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 ZNF44P15621 663 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 CCL3L1P16619 93 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 FSTP19883 344 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 CRHBPP24387 322 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 MAPK3P27361 379 aaPredicted RBP19.22■□□□□ 0.67
SNF8-217ENST00000576353 ERP29P30040 261 aaKnown RBP19.22■□□□□ 0.67
SNF8-217ENST00000576353 IRF3Q14653 427 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 MED22Q15528 200 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 C11orf42Q8N5U0 333 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 MS4A15Q8N5U1 240 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 TMEM86BQ8N661 226 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 SSMEM1Q8WWF3 244 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 SGCDQ92629 289 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 CNBD2Q96M20 576 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 S100A13Q99584 98 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 FOXJ3Q9UPW0 622 aa19.22■□□□□ 0.67
SNF8-217ENST00000576353 LSM2Q9Y333 95 aaKnown RBP19.22■□□□□ 0.67
SNF8-217ENST00000576353 A0A1W2PRD5 423 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 A0A1W2PRF3 423 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 A0A1W2PRM7 423 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 RBP4P02753 201 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 FBP1P09467 338 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 OR3A1P47881 315 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 OR3A4PP47883 348 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 ERVFRD-1P60508 538 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 DOC2BQ14184 412 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 C16orf87Q6PH81 154 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 Q8NFD4 153 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 DERL3Q96Q80 235 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 OR5M11Q96RB7 305 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 ZNF184Q99676 751 aaPredicted RBP19.21■□□□□ 0.67
SNF8-217ENST00000576353 METTL9Q9H1A3 318 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 ING4Q9UNL4 249 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 POMT1Q9Y6A1 747 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 LINC00312Q9Y6C7 94 aa19.21■□□□□ 0.67
SNF8-217ENST00000576353 TRAV8-7A0A075B6U6 113 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 A0A0G2JK05 382 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 A0A1W2PPK0 400 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 MEIOCA2RUB1 952 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 C17orf98A8MV24 154 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 PAHP00439 452 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 DLX6P56179 175 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 P2RX3P56373 397 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 GPR50Q13585 617 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 MIDNQ504T8 468 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 RBM48Q5RL73 367 aaKnown RBP19.2■□□□□ 0.66
SNF8-217ENST00000576353 HCP5Q6MZN7 132 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 Q6P435 159 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 C12orf54Q6X4T0 127 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 LDLRAD3Q86YD5 345 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 OR51T1Q8NGJ9 327 aa19.2■□□□□ 0.66
SNF8-217ENST00000576353 NR1H4Q96RI1 486 aaPredicted RBP19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms