RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 MSTNO14793 375 aa12.67□□□□□ -0.38
SCARF1-209ENST00000576012 PGA3P0DJD8 388 aa12.67□□□□□ -0.38
SCARF1-209ENST00000576012 DYNLT3P51808 116 aa12.67□□□□□ -0.38
SCARF1-209ENST00000576012 MRPS34P82930 218 aaKnown RBP12.67□□□□□ -0.38
SCARF1-209ENST00000576012 TMEM92Q6UXU6 159 aa12.67□□□□□ -0.38
SCARF1-209ENST00000576012 CMTM1Q8IZ96 169 aa12.67□□□□□ -0.38
SCARF1-209ENST00000576012 LGI3Q8N145 548 aa12.67□□□□□ -0.38
SCARF1-209ENST00000576012 YPEL4Q96NS1 127 aa12.67□□□□□ -0.38
SCARF1-209ENST00000576012 NCOA6Q14686 2063 aaPredicted RBP12.67□□□□□ -0.38
SCARF1-209ENST00000576012 TCRBV21S2A2A0A5A6 115 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 OR2J2O76002 312 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 CTSDP07339 412 aaPredicted RBP12.66□□□□□ -0.38
SCARF1-209ENST00000576012 GUSBP08236 651 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 DUSP1P28562 367 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 ERVS71-1P61550 626 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 TMEM187Q14656 261 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 HIKESHIQ53FT3 197 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 THNSL2Q86YJ6 484 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 COMMD1Q8N668 190 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 CABLES2Q9BTV7 478 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 CUTCQ9NTM9 273 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 UBE2J1Q9Y385 318 aaPredicted RBP12.66□□□□□ -0.38
SCARF1-209ENST00000576012 STRAPQ9Y3F4 350 aaKnown RBP12.66□□□□□ -0.38
SCARF1-209ENST00000576012 MUC3AQ02505 3323 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 FREM2Q5SZK8 3169 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 COL6A3P12111 3177 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 CEACAM18A8MTB9 384 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 PTBP3O95758 552 aaKnown RBP12.66□□□□□ -0.38
SCARF1-209ENST00000576012 MLF1P58340 268 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 MYBPHQ13203 477 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 ICAM4Q14773 271 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 GPR157Q5UAW9 335 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 FAM69BQ5VUD6 431 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 DEGS2Q6QHC5 323 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 CLEC2AQ6UVW9 174 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 C1QL4Q86Z23 238 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 UEVLDQ8IX04 471 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 ZNF664Q8N3J9 261 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 TMEM37Q8WXS4 190 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 SLC25A31Q9H0C2 315 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 PCDH15Q96QU1 1955 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 CD200P41217 278 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 DLX2Q07687 328 aaPredicted RBP12.66□□□□□ -0.38
SCARF1-209ENST00000576012 LYZL4Q96KX0 146 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 ZNF665Q9H7R5 613 aa12.66□□□□□ -0.38
SCARF1-209ENST00000576012 EPOPA6NHQ4 379 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 TSPAN2O60636 221 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 PRSS8Q16651 343 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 GLRX2Q9NS18 164 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 OR14J1Q9UGF5 321 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 VSTM2BA6NLU5 285 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 IGKV3-11P04433 115 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 PATE4P0C8F1 98 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 GNRHRP30968 328 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 ADIRFQ15847 76 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 DEFB133Q30KQ1 61 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 RSG1Q9BU20 258 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 RBM24Q9BX46 236 aaKnown RBP12.65□□□□□ -0.38
SCARF1-209ENST00000576012 CBLN4Q9NTU7 201 aa12.65□□□□□ -0.38
SCARF1-209ENST00000576012 EFNA2O43921 213 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 NKX2-1P43699 371 aaPredicted RBP12.64□□□□□ -0.39
SCARF1-209ENST00000576012 HLA-DRB3P79483 266 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 C1orf87Q8N0U7 546 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 FBXL14Q8N1E6 418 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 NKX2-4Q9H2Z4 354 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 CALHM2Q9HA72 323 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 ABCA7Q8IZY2 2146 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 KIR2DS5A0A0G2JLQ3 304 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 A0A0G2JNG1 304 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 C3orf80F5H4A9 247 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 KIR2DS3K7RE56 304 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 ADAM20O43506 726 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 CLDN17P56750 224 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 RPS18P62269 152 aaKnown RBP12.64□□□□□ -0.39
SCARF1-209ENST00000576012 TMEM267Q0VDI3 215 aaPredicted RBP12.64□□□□□ -0.39
SCARF1-209ENST00000576012 KIR2DS5Q14953 304 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 CFAP161Q6P656 301 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 LIAT1Q6ZQX7 453 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 GPBAR1Q8TDU6 330 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 LMX1AQ8TE12 382 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 CPNE4Q96A23 557 aaPredicted RBP12.64□□□□□ -0.39
SCARF1-209ENST00000576012 BOD1Q96IK1 185 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 GUCA1AP43080 201 aaPredicted RBP12.64□□□□□ -0.39
SCARF1-209ENST00000576012 GLIPR1P48060 266 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 HERV-K104P61576 105 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF695Q8IW36 515 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 TMEM234Q8WY98 164 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 AURKAIP1Q9NWT8 199 aaPredicted RBP12.64□□□□□ -0.39
SCARF1-209ENST00000576012 P4HTMQ9NXG6 502 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 LAMP3Q9UQV4 416 aa12.64□□□□□ -0.39
SCARF1-209ENST00000576012 TRIOBPQ9H2D6 2365 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 SERPINE3A8MV23 424 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 ZNF43P17038 809 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 CD33P20138 364 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 BMP5P22003 454 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 AADACP22760 399 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 P2RY6Q15077 328 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 BATFQ16520 125 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 DOK3Q7L591 496 aa12.63□□□□□ -0.39
SCARF1-209ENST00000576012 LFNGQ8NES3 379 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms