RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 FRAS1Q86XX4 4008 aa12.7□□□□□ -0.38
CTDNEP1-211ENST00000575783 RBMY1BA6NDE4 496 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 RBMY1EA6NEQ0 496 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 NCBP2LA6PVI3 153 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 PRR23D1E9PI22 279 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 IGKV1D-33P01593 117 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 IGKV1-33P01594 117 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 TTRP02766 147 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 ELANEP08246 267 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 RBMY1DP0C7P1 496 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 PRR23D2P0DMB1 279 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 GP9P14770 177 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 GPR12P47775 334 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 OR3A1P47881 315 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 RPS7P62081 194 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 MFGE8Q08431 387 aaPredicted RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 CGB2Q6NT52 195 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 HACD2Q6Y1H2 254 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 TTTY10Q9BZA0 68 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 ING3Q9NXR8 418 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 TAS2R3Q9NYW6 316 aa12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 NUFIP1Q9UHK0 495 aaKnown RBP12.69□□□□□ -0.38
CTDNEP1-211ENST00000575783 SIRPB1O00241 398 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 SAP30O75446 220 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 IGHV3-7P01780 117 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 GLIPR1P48060 266 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 POU3F4P49335 361 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 ZNF91Q05481 1191 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 AESQ08117 197 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 DIAPH2-AS1Q14236 149 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 SRSF7Q16629 238 aaKnown RBP eCLIP12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 ZNF829Q3KNS6 432 aaPredicted RBP12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 DEGS2Q6QHC5 323 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 LHFPL2Q6ZUX7 228 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 ENTHD1Q8IYW4 607 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 OR1N2Q8NGR9 330 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 TEX47Q8TBZ9 253 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 CORO2AQ92828 525 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 NSMCE2Q96MF7 247 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 SPAG4Q9NPE6 437 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 ISYNA1Q9NPH2 558 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 RBFOX1Q9NWB1 397 aaKnown RBP12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 V9GYS6 101 aa12.68□□□□□ -0.38
CTDNEP1-211ENST00000575783 RYR1P21817 5038 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 IGKV1-27A0A075B6S5 117 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 A0A1W2PPI3 338 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 H3BN98 237 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 PTGFRP43088 359 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 NPBWR2P48146 333 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 RNF152Q8N8N0 203 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 OR14K1Q8NGZ2 314 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 OR9G1Q8NH87 305 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 LEAP2Q969E1 77 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 MAGEL2Q9UJ55 1249 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 IKZF2Q9UKS7 526 aa12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 AMMECR1Q9Y4X0 333 aaPredicted RBP12.67□□□□□ -0.38
CTDNEP1-211ENST00000575783 A0A087X0M5 115 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 A0A1B0GX30 115 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 FUOMA2VDF0 154 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 PRR32B1ATL7 298 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 HMGB1P1B2RPK0 211 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 H3BSH0 61 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 MRPL3P09001 348 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 OR8U8P0C7N1 319 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 RIDAP52758 137 aaKnown RBP12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 BCL2L15Q5TBC7 163 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 CPOQ8IVL8 374 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 ZNF679Q8IYX0 411 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 FAM58AQ8N1B3 248 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 BBS1Q8NFJ9 593 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 OR5B12Q96R08 314 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 ABCG5Q9H222 651 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 SEBOXQ9HB31 216 aaPredicted RBP12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 SORL1Q92673 2214 aa12.66□□□□□ -0.38
CTDNEP1-211ENST00000575783 ALMS1Q8TCU4 4167 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 A0A1B0GTI1 187 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 LOC110117498-PIK3R3F6TDL0 507 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 PRODHO43272 600 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 RRP9O43818 475 aaKnown RBP12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 ENTPD6O75354 484 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 ZNF254O75437 659 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 IGHV4-30-4P0DP06 118 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 PRKACAP17612 351 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 BCL3P20749 454 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 MYF6P23409 242 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 GABPB1Q06547 395 aaPredicted RBP12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 MADCAM1Q13477 382 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 ZNF146Q15072 292 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 UBE2V2Q15819 145 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 ASPHD1Q5U4P2 390 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 Q8IYB0 196 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 DCUN1D4Q92564 292 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 DGCR6LQ9BY27 220 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 YIPF3Q9GZM5 350 aa12.65□□□□□ -0.38
CTDNEP1-211ENST00000575783 DSCAML1Q8TD84 2053 aa12.65□□□□□ -0.39
CTDNEP1-211ENST00000575783 ODAMA1E959 279 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 J3QR06 171 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 OVOL1O14753 267 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 SH2D1BO14796 132 aa12.64□□□□□ -0.39
CTDNEP1-211ENST00000575783 IGHG4P01861 327 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms