RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 HIST1H1DP16402 221 aaKnown RBP20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 MNDAP41218 407 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 MPV17LQ2QL34 196 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 HFEQ30201 348 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 ATAD3CQ5T2N8 411 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 Q6ZTK2 550 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 NRARPQ7Z6K4 114 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 LINC00596Q86U02 117 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 MARVELD3Q96A59 401 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 NEDD4LQ96PU5 975 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 PECRQ9BY49 303 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 NLKQ9UBE8 527 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 KCNK7Q9Y2U2 307 aa20.18■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A10PA6NDY2 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A18PA6NE21 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A16PA6NEW6 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A20PA6NIJ5 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A8PA6NJQ4 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A7PA6NKC0 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A22PA8MWA6 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A12PA8MX19 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A5PA8MXJ8 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A23PA8MXZ1 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 NDUFS7O75251 213 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 KNG1P01042 644 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A15PP0C7V4 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A13PP0C7W8 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A14PP0C7W9 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A24PP0C7X0 464 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 CHATP28329 748 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 PITPNAQ00169 270 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 ZNF260Q3ZCT1 412 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 C11orf54Q9H0W9 315 aaPredicted RBP20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 WIPI2Q9Y4P8 454 aa20.17■□□□□ 0.82
ATPAF1-213ENST00000574428 RFPL4AA6NLU0 287 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 RFPL4AL1F8VTS6 287 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 MFNGO00587 321 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 PDCD6O75340 191 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 HAND1O96004 215 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 ZNF44P15621 663 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 Q6P435 159 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 C1orf87Q8N0U7 546 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 DEFB108BQ8NET1 73 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 POM121Q96HA1 1249 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 PLEKHJ1Q9NW61 149 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 MEIOCA2RUB1 952 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 OR2AT4A6NND4 320 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 SIRPB1O00241 398 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 HSPB6O14558 160 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 DEGS1O15121 323 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 OR2H2O95918 312 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 PSG2P11465 335 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 DAOP14920 347 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 FUT3P21217 361 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 FAM90A1Q86YD7 464 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 TRIM63Q969Q1 353 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 FAAP24Q9BTP7 215 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 RABL2AQ9UBK7 228 aaPredicted RBP20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 RABL2BQ9UNT1 228 aa20.16■□□□□ 0.82
ATPAF1-213ENST00000574428 FBN2P35556 2912 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 TACC2O95359 2948 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 IFNL4K9M1U5 179 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 SH2D1BO14796 132 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 SSTR2P30874 369 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 DGCR2P98153 550 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 GUCA2AQ02747 115 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 ZNF787Q6DD87 383 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 RDH5Q92781 318 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 SULT4A1Q9BR01 284 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 RCC2Q9P258 522 aaKnown RBP20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 CELSR2Q9HCU4 2923 aa20.15■□□□□ 0.82
ATPAF1-213ENST00000574428 AKAP6Q13023 2319 aa20.14■□□□□ 0.82
ATPAF1-213ENST00000574428 IGKV1D-17A0A075B6S4 117 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 TRAV24A0A0B4J272 114 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 OOEPA6NGQ2 149 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 LANCL1O43813 399 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 RP2O75695 350 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 TPPPO94811 219 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 KRTAP10-9P60411 292 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 MICBQ29980 383 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 C11orf91Q3C1V1 193 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 CD177Q8N6Q3 437 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 ST8SIA4Q92187 359 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 DYRK2Q92630 601 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 THAP7Q9BT49 309 aaPredicted RBP20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 IFT22Q9H7X7 185 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 GLS2Q9UI32 602 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 HSF4Q9ULV5 492 aa20.14■□□□□ 0.81
ATPAF1-213ENST00000574428 GSTP1P09211 210 aaKnown RBP20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 TEX36Q5VZQ5 186 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 CADM3Q8N126 398 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 SUMF2Q8NBJ7 301 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 C15orf40Q8WUR7 153 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 NUDCD2Q8WVJ2 157 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 METRNQ9UJH8 293 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 CENPEQ02224 2701 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 PPIAL4EA0A075B759 164 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 UBE2QL1A1L167 161 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 PPIAL4DF5H284 164 aa20.13■□□□□ 0.81
ATPAF1-213ENST00000574428 SLC33A1O00400 549 aaPredicted RBP20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms