RNA–Protein interactions for RNA: ENST00000573827.1

SMG6-214, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-214ENST00000573827 RPL36Q9Y3U8 105 aaKnown RBP14.08□□□□□ -0.16
SMG6-214ENST00000573827 hADV38S2A0JD32 116 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 TMEM212A6NML5 194 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 MGST3O14880 152 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 OR2H2O95918 312 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 PEX2P28328 305 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 KIR2DS4P43632 304 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 GTF2A1P52655 376 aaPredicted RBP14.07□□□□□ -0.16
SMG6-214ENST00000573827 MRPL28Q13084 256 aaKnown RBP14.07□□□□□ -0.16
SMG6-214ENST00000573827 IL18R1Q13478 541 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 CDK5R1Q15078 307 aa14.07□□□□□ -0.16
SMG6-214ENST00000573827 TBL2Q9Y4P3 447 aaKnown RBP14.07□□□□□ -0.16
SMG6-214ENST00000573827 SIRT4Q9Y6E7 314 aaPredicted RBP14.07□□□□□ -0.16
SMG6-214ENST00000573827 SIRPB1O00241 398 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 CLIC3O95833 236 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 JUNBP17275 347 aaPredicted RBP14.06□□□□□ -0.16
SMG6-214ENST00000573827 GABRR1P24046 479 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 GABRA5P31644 462 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 ETV1P50549 477 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 RAB13P51153 203 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 SNU13P55769 128 aaKnown RBP14.06□□□□□ -0.16
SMG6-214ENST00000573827 KISS1Q15726 138 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 ZSCAN26Q16670 478 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 ZNF691Q5VV52 312 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 BAIAP2L2Q6UXY1 529 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 OR51A2Q8NGJ7 313 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 OR13D1Q8NGV5 346 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 OR5AK2Q8NH90 309 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 MALSU1Q96EH3 234 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 MRPL48Q96GC5 212 aaKnown RBP14.06□□□□□ -0.16
SMG6-214ENST00000573827 COQ2Q96H96 371 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 RANBP3Q9H6Z4 567 aaPredicted RBP14.06□□□□□ -0.16
SMG6-214ENST00000573827 RHOFQ9HBH0 211 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 GSTK1Q9Y2Q3 226 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 SESN1Q9Y6P5 492 aa14.06□□□□□ -0.16
SMG6-214ENST00000573827 IGHV2-26A0A0B4J1V2 119 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 A0A0G2JK05 382 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 A6NDX4 124 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 SULT1B1O43704 296 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 CYB5AP00167 134 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 ARG1P05089 322 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 CCDC159P0C7I6 412 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 GDNFP39905 211 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 DYNLT3P51808 116 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 LGALS4P56470 323 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 KLHL22Q53GT1 634 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 SERPINA12Q8IW75 414 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 ZNF485Q8NCK3 441 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 Q8NFD4 153 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 CORO2AQ92828 525 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 TCF7L1Q9HCS4 588 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 EXOSC4Q9NPD3 245 aaKnown RBP14.05□□□□□ -0.16
SMG6-214ENST00000573827 TCF19Q9Y242 345 aa14.05□□□□□ -0.16
SMG6-214ENST00000573827 M0QZ24 198 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 SLC33A1O00400 549 aaPredicted RBP14.04□□□□□ -0.16
SMG6-214ENST00000573827 TIMM23O14925 209 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 BAG2O95816 211 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 TSPAN15O95858 294 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 LALBAP00709 142 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 CSN2P05814 226 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 GLIPR1P48060 266 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 GBX2P52951 348 aaPredicted RBP14.04□□□□□ -0.16
SMG6-214ENST00000573827 ADARB1P78563 741 aaKnown RBP14.04□□□□□ -0.16
SMG6-214ENST00000573827 UTF1Q5T230 341 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 OR2G6Q5TZ20 316 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 ELP2Q6IA86 826 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 LAIR2Q6ISS4 152 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 ASCL4Q6XD76 172 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 LIAT1Q6ZQX7 453 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 Q8N2B8 174 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 OR5D14Q8NGL3 314 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 OR4P4Q8NGL7 312 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 CNIH3Q8TBE1 160 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 WIPF2Q8TF74 440 aaPredicted RBP14.04□□□□□ -0.16
SMG6-214ENST00000573827 CFHR4Q92496 578 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 FOXRED1Q96CU9 486 aaPredicted RBP14.04□□□□□ -0.16
SMG6-214ENST00000573827 MYCBPQ99417 103 aaPredicted RBP14.04□□□□□ -0.16
SMG6-214ENST00000573827 CDCA4Q9BXL8 241 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 TMEM133Q9H2Q1 129 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 MMP27Q9H306 513 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 ZNF702PQ9H963 129 aa14.04□□□□□ -0.16
SMG6-214ENST00000573827 UBE2J1Q9Y385 318 aaPredicted RBP14.04□□□□□ -0.16
SMG6-214ENST00000573827 FAM90A22PA8MWA6 464 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 SH2D1BO14796 132 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 RPSAP08865 295 aaKnown RBP14.03□□□□□ -0.16
SMG6-214ENST00000573827 CGB3P0DN86 165 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 CGB7P0DN87 165 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 DCKP27707 260 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 SSX2Q16385 188 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 CCDC58Q4VC31 144 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 PLA1AQ53H76 456 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 MINOS1Q5TGZ0 78 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 HEPN1Q6WQI6 88 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 PXT1Q8NFP0 134 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 HAVCR2Q8TDQ0 301 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 RAB18Q9NP72 206 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 CLEC2DQ9UHP7 191 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 DIMT1Q9UNQ2 313 aaKnown RBP14.03□□□□□ -0.16
SMG6-214ENST00000573827 DHDHQ9UQ10 334 aa14.03□□□□□ -0.16
SMG6-214ENST00000573827 MINOS1-NBL1R4GNA1 71 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms