RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, human

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDC27-215	ENST00000573550	MRPL22	Q9NWU5	206 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-215	ENST00000573550	COMMD9	Q9P000	198 aa		4.06	□□□□□ -1.76
CDC27-215	ENST00000573550	MRPL15	Q9P015	296 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-215	ENST00000573550	GHRL	Q9UBU3	117 aa		4.06	□□□□□ -1.76
CDC27-215	ENST00000573550	RAB22A	Q9UL26	194 aa		4.06	□□□□□ -1.76
CDC27-215	ENST00000573550	ZNF346	Q9UL40	294 aa	Known RBP	4.06	□□□□□ -1.76
CDC27-215	ENST00000573550	TMED7	Q9Y3B3	224 aa		4.06	□□□□□ -1.76
CDC27-215	ENST00000573550	IGHV4-4	A0A075B6R2	117 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	IGKV3D-15	A0A087WSY6	115 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550		A0A087WW49	117 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	LOC102725191	A0A1B0GVB3	256 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550		A0A1B0GX78	115 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	TVP23A	A6NH52	213 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	OR5H14	A6NHG9	310 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550		F8VVB4	439 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550		F8VWA3	439 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550		H0YC42	278 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	FGF16	O43320	207 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	SLC16A7	O60669	478 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	CDC123	O75794	336 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	ZFAND5	O76080	213 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	PNP	P00491	289 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	HLA-A	P01891	365 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	GP1BA	P07359	652 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	RAB3A	P20336	220 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	CNR1	P21554	472 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	IL32	P24001	234 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	PAX6	P26367	422 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	CD27	P26842	260 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	CD34	P28906	385 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	ALDH3B1	P43353	468 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	DNASE1L1	P49184	302 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	MAZ	P56270	477 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	HNRNPK	P61978	463 aa	Known RBP eCLIP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	EIF5A	P63241	154 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	QRFP	P83859	136 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	FLI1	Q01543	452 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	MFGE8	Q08431	387 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	EIF2B1	Q14232	305 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	STK11	Q15831	433 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	NNAT	Q16517	81 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	C14orf28	Q4W4Y0	310 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	GLYATL3	Q5SZD4	288 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	FAAP20	Q6NZ36	180 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	ALKAL2	Q6UX46	152 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550		Q6ZSR3	168 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	BIVM	Q86UB2	503 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	ZNF546	Q86UE3	836 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	COMMD2	Q86X83	199 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	HOGA1	Q86XE5	327 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	C9orf40	Q8IXQ3	194 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	BPIFB2	Q8N4F0	458 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	ZNF611	Q8N823	705 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	PLPP5	Q8NEB5	264 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	SLC30A7	Q8NEW0	376 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	TMEM185A	Q8NFB2	350 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	STEAP2	Q8NFT2	490 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	OR4D10	Q8NGI6	311 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	OR52B4	Q8NGK2	314 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	OR10S1	Q8NGN2	331 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	OR13C8	Q8NGS7	320 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	GPR119	Q8TDV5	335 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	HPSE2	Q8WWQ2	592 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	FAM46B	Q96A09	425 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	C10orf35	Q96D05	121 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	GMPPA	Q96IJ6	420 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	CXorf58	Q96LI9	332 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	LINC00052	Q96N35	136 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	MS4A10	Q96PG2	267 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	MAP3K3	Q99759	626 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	RPP25	Q9BUL9	199 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	OR8D2	Q9GZM6	311 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	TCEAL2	Q9H3H9	227 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	BEX1	Q9HBH7	125 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	RAB18	Q9NP72	206 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	CHST11	Q9NPF2	352 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	ZC4H2	Q9NQZ6	224 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	STARD5	Q9NSY2	213 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	TMEM100	Q9NV29	134 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	FAM206A	Q9NX38	181 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	SOHLH2	Q9NX45	425 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	TAS2R4	Q9NYW5	299 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	B3GAT1	Q9P2W7	334 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	OR52A1	Q9UKL2	312 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	KLK13	Q9UKR3	277 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	PRELID1	Q9Y255	219 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	KLF2	Q9Y5W3	355 aa	Predicted RBP	4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	POMT1	Q9Y6A1	747 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550	THADA	Q6YHU6	1953 aa		4.05	□□□□□ -1.76
CDC27-215	ENST00000573550		A0A087WV48	116 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	IGHV5-51	A0A0C4DH38	117 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	TMEM269	A0A1B0GVZ9	245 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	C9orf170	A2RU37	121 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	DHRS7C	A6NNS2	312 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	SERPINE3	A8MV23	424 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	TMEM14DP	A8MWL7	114 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	ZNF878	C9JN71	531 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550	NPIPA5	E9PKD4	350 aa		4.04	□□□□□ -1.76
CDC27-215	ENST00000573550		H7C1C5	153 aa		4.04	□□□□□ -1.76

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