RNA–Protein interactions for RNA: ENST00000572174.5

RPAIN-211, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-211ENST00000572174 TCF7L1Q9HCS4 588 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 NOX4Q9NPH5 578 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 ZNF69Q9UC07 566 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 GSTK1Q9Y2Q3 226 aa11.49□□□□□ -0.57
RPAIN-211ENST00000572174 F8VVB4 439 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 F8VWA3 439 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 ARL6IP5O75915 188 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 CSN2P05814 226 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 SFTPBP07988 381 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 HSMCR30P0CW71 290 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 PRTN3P24158 256 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 ERP29P30040 261 aaKnown RBP11.48□□□□□ -0.57
RPAIN-211ENST00000572174 CEBPDP49716 269 aaPredicted RBP11.48□□□□□ -0.57
RPAIN-211ENST00000572174 ERVFRD-1P60508 538 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 OR51T1Q8NGJ9 327 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 OR13C5Q8NGS8 318 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 FCGR1BQ92637 280 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 LHX4Q969G2 390 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 ZDHHC16Q969W1 377 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 OR5M11Q96RB7 305 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 UQCC2Q9BRT2 126 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 HEXA-AS1Q9H8Q6 139 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 SF3B6Q9Y3B4 125 aaKnown RBP11.48□□□□□ -0.57
RPAIN-211ENST00000572174 LINC00312Q9Y6C7 94 aa11.48□□□□□ -0.57
RPAIN-211ENST00000572174 IGKV1-12A0A0C4DH73 117 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 CENPVL3A0A0U1RRI6 287 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 CLDN34H7C241 214 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 DEGS1O15121 323 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 OR2H2O95918 312 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 IGKV1D-12P01611 117 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 TFF1P04155 84 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 CPEP16870 476 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 LMO1P25800 156 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 TPBGQ13641 420 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 TUSC1Q2TAM9 212 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 ACSM3Q53FZ2 586 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 NHLRC3Q5JS37 347 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 GLT8D1Q68CQ7 371 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 AWAT2Q6E213 333 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 FGFRL1Q8N441 504 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 JAGN1Q8N5M9 183 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 Q8NFD4 153 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 C22orf15Q8WYQ4 148 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 SLC25A28Q96A46 364 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 MRPS24Q96EL2 167 aaKnown RBP11.47□□□□□ -0.57
RPAIN-211ENST00000572174 MGLLQ99685 303 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 TMED9Q9BVK6 235 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 GAL3ST2Q9H3Q3 398 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 C19orf12Q9NSK7 152 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 GHRLQ9UBU3 117 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 FAM96BQ9Y3D0 163 aa11.47□□□□□ -0.57
RPAIN-211ENST00000572174 ANK3Q12955 4377 aaKnown RBP11.46□□□□□ -0.57
RPAIN-211ENST00000572174 TRGV10A0A0A0MS01 117 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 HTR3BO95264 441 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 MAS1P04201 325 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 UBBP0CG47 229 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 ZNF728P0DKX0 622 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 GTF2F2P13984 249 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 OR3A4PP47883 348 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 UBE2E1P51965 193 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 SNU13P55769 128 aaKnown RBP11.46□□□□□ -0.57
RPAIN-211ENST00000572174 BAMBIQ13145 260 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 EDDM3AQ14507 147 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 MPV17LQ2QL34 196 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 HSD17B12Q53GQ0 312 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 LIPKQ5VXJ0 399 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 ASPHD2Q6ICH7 369 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 BRD3OSQ6XYD6 125 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 C17orf107Q6ZR85 190 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 TRAPPC6BQ86SZ2 158 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 TMEM86BQ8N661 226 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 SIGLECL1Q8N7X8 197 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 SPATA3Q8NHX4 192 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 FAM216AQ8WUB2 273 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 ZNF714Q96N38 554 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 SPACA1Q9HBV2 294 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 ACOT13Q9NPJ3 140 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 SIRT7Q9NRC8 400 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 ING4Q9UNL4 249 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 MRPS28Q9Y2Q9 187 aaKnown RBP11.46□□□□□ -0.57
RPAIN-211ENST00000572174 UBE2J1Q9Y385 318 aaPredicted RBP11.46□□□□□ -0.57
RPAIN-211ENST00000572174 POMT1Q9Y6A1 747 aa11.46□□□□□ -0.57
RPAIN-211ENST00000572174 COL6A5A8TX70 2615 aa11.46□□□□□ -0.58
RPAIN-211ENST00000572174 TRAV8-7A0A075B6U6 113 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 IGHV3OR16-10A0A075B7F0 116 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 BTBD17A6NE02 478 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 SIRPB1O00241 398 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
RPAIN-211ENST00000572174 RGS9O75916 674 aaPredicted RBP11.45□□□□□ -0.58
RPAIN-211ENST00000572174 PAHP00439 452 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 FBP1P09467 338 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 SERPINA2P20848 420 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 GABRA5P31644 462 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 OR3A1P47881 315 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 P2RX3P56373 397 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 MIDNQ504T8 468 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 TMEM200BQ69YZ2 307 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 CRIP3Q6Q6R5 217 aa11.45□□□□□ -0.58
RPAIN-211ENST00000572174 UNQ9370/PRO34162Q6UXP9 181 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms