RNA–Protein interactions for RNA: ENST00000571806.1

TSR1-202, Transcript of TSR1, ribosome maturation factor, humanhuman

TSL 2

Gene TSR1, Length 794 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR1-202ENST00000571806 VAX1Q5SQQ9 334 aa12.43□□□□□ -0.42
TSR1-202ENST00000571806 CCDC144NLQ6NUI1 221 aa12.43□□□□□ -0.42
TSR1-202ENST00000571806 SSX6Q7RTT6 188 aa12.43□□□□□ -0.42
TSR1-202ENST00000571806 KCTD20Q7Z5Y7 419 aa12.43□□□□□ -0.42
TSR1-202ENST00000571806 SPSB1Q96BD6 273 aa12.43□□□□□ -0.42
TSR1-202ENST00000571806 RBM14Q96PK6 669 aaKnown RBP12.43□□□□□ -0.42
TSR1-202ENST00000571806 TBX5Q99593 518 aa12.43□□□□□ -0.42
TSR1-202ENST00000571806 EXOSC4Q9NPD3 245 aaKnown RBP12.43□□□□□ -0.42
TSR1-202ENST00000571806 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.43□□□□□ -0.42
TSR1-202ENST00000571806 RBFOX1Q9NWB1 397 aaKnown RBP12.43□□□□□ -0.42
TSR1-202ENST00000571806 LOC107986453A0A1B0GWG9 222 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 M0R129 80 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 ENTPD6O75354 484 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 MPIG6BO95866 241 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 ISG15P05161 165 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 OCM2P0CE71 109 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 OCMP0CE72 109 aaPredicted RBP12.42□□□□□ -0.42
TSR1-202ENST00000571806 PRKACAP17612 351 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 BCL3P20749 454 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 LMO1P25800 156 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 CD34P28906 385 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 MNDAP41218 407 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 OR3A1P47881 315 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 NPBWR2P48146 333 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 PDZK1IP1Q13113 114 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 ATP6AP1Q15904 470 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 TMEM95Q3KNT9 176 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 PRSS35Q8N3Z0 413 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 OR10H4Q8NGA5 316 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 OR8J1Q8NGP2 316 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 SLC25A33Q9BSK2 321 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 GABARAPL1Q9H0R8 117 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 NEK6Q9HC98 313 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 HMG20AQ9NP66 347 aa12.42□□□□□ -0.42
TSR1-202ENST00000571806 TOR1AO14656 332 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 MITFO75030 526 aaPredicted RBP12.41□□□□□ -0.42
TSR1-202ENST00000571806 CSN2P05814 226 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 LPLP06858 475 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 RPSAP08865 295 aaKnown RBP12.41□□□□□ -0.42
TSR1-202ENST00000571806 JUNBP17275 347 aaPredicted RBP12.41□□□□□ -0.42
TSR1-202ENST00000571806 ATF1P18846 271 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 CDK2P24941 298 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 FASP25445 335 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 DUSP1P28562 367 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 EPHA2P29317 976 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 POU3F4P49335 361 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 ABCA11PQ4W5N1 156 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 CCDC121Q6ZUS5 278 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 CHST4Q8NCG5 386 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 OR4D6Q8NGJ1 314 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 MYDGFQ969H8 173 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 PCDHB16Q9NRJ7 776 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 IL36RNQ9UBH0 155 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 HHLA2Q9UM44 414 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 NOTCH3Q9UM47 2321 aa12.41□□□□□ -0.42
TSR1-202ENST00000571806 A0A087X0M5 115 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 A0A1B0GX30 115 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 H3BSH0 61 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 BUB1B-PAK6H3BSN5 160 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 MMP23AO75900 390 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 OR2H2O95918 312 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 FAM106CPP0CH98 169 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 ZNF20P17024 532 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 PTGFRP43088 359 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 ISL1P61371 349 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 DCTN2Q13561 401 aaKnown RBP12.4□□□□□ -0.42
TSR1-202ENST00000571806 TCTEX1D4Q5JR98 221 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 SAXO1Q8IYX7 474 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 OR51D1Q8NGF3 324 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 DPF1Q92782 380 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 OPALINQ96PE5 141 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 MYCBPQ99417 103 aaPredicted RBP12.4□□□□□ -0.42
TSR1-202ENST00000571806 COMMD4Q9H0A8 199 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 ZMAT5Q9UDW3 170 aaKnown RBP12.4□□□□□ -0.42
TSR1-202ENST00000571806 GNG8Q9UK08 70 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 GSTK1Q9Y2Q3 226 aa12.4□□□□□ -0.42
TSR1-202ENST00000571806 IGKV1-9A0A0C4DH69 117 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 ZNF729A6NN14 1252 aaPredicted RBP12.39□□□□□ -0.43
TSR1-202ENST00000571806 SIRPB1O00241 398 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 KDM4BO94953 1096 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 MT-ND2P03891 347 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 FCGR1AP12314 374 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 SLC6A1P30531 599 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 EGFEM1PQ0D2K5 195 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 HLA-DRB5Q30154 266 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 TPTE2P1Q5T6R2 138 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 PRAMEF5Q5TYX0 476 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 FDX2Q6P4F2 183 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 THNSL2Q86YJ6 484 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 OSR2Q8N2R0 312 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 ZNF565Q8N9K5 539 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 OR2G2Q8NGZ5 317 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 TRUB1Q8WWH5 349 aaKnown RBP12.39□□□□□ -0.43
TSR1-202ENST00000571806 FGGYQ96C11 551 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 SLC7A6OSQ96CW6 309 aaPredicted RBP12.39□□□□□ -0.43
TSR1-202ENST00000571806 ADAT3Q96EY9 351 aaPredicted RBP12.39□□□□□ -0.43
TSR1-202ENST00000571806 MBOAT4Q96T53 435 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 OSBPL10Q9BXB5 764 aa12.39□□□□□ -0.43
TSR1-202ENST00000571806 OR6C3Q9NZP0 311 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms