RNA–Protein interactions for RNA: ENST00000570380.5

CTDNEP1-202, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 506 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-202ENST00000570380 CLVS2Q5SYC1 327 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 SLX4IPQ5VYV7 408 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 SATL1Q86VE3 508 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 ZNF454Q8N9F8 522 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR9Q2Q8NGE9 314 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 DYDC1Q8WWB3 177 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 DLX4Q92988 240 aaPredicted RBP8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 SLAMF9Q96A28 289 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 HRASLS5Q96KN8 279 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 BTBD10Q9BSF8 475 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 CADM1Q9BY67 442 aaKnown RBP8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 PBOV1Q9GZY1 135 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 SEBOXQ9HB31 216 aaPredicted RBP8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 SAR1AQ9NR31 198 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 TAS2R3Q9NYW6 316 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 KIAA1456Q9P272 454 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 BAIAP2Q9UQB8 552 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 V9GYQ6 96 aa8.07□□□□□ -1.12
CTDNEP1-202ENST00000570380 NCBP2LA6PVI3 153 aaKnown RBP8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 DLGAP1O14490 977 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 IFNGP01579 166 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 ZNF3P17036 446 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 DUSP1P28562 367 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 GLIPR1P48060 266 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 ZNF91Q05481 1191 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 GLYATQ6IB77 296 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 ACSM6Q6P461 480 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 RASSF6Q6ZTQ3 369 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 CATSPERDQ86XM0 798 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 LYPD6Q86Y78 171 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 TGIF2LXQ8IUE1 241 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 ZNF491Q8N8L2 437 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 Q8N9W7 124 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR9G1Q8NH87 305 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 GATAD1Q8WUU5 269 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 OTULINQ96BN8 352 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 UBE2E2Q96LR5 201 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR5B12Q96R08 314 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 KLK15Q9H2R5 256 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 LIN7CQ9NUP9 197 aaKnown RBP8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 ARMC1Q9NVT9 282 aa8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 SAMD4AQ9UPU9 718 aaKnown RBP8.06□□□□□ -1.12
CTDNEP1-202ENST00000570380 MUC4Q99102 2169 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 IGKV1-27A0A075B6S5 117 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 FAM230AA0A1W2PPH8 454 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 RIIAD1A6NNX1 92 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 J3QR06 171 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 RRP9O43818 475 aaKnown RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 EDF1O60869 148 aaKnown RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 GASTP01350 101 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 IGHV3-7P01780 117 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 TTRP02766 147 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 ALOX5APP20292 161 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 NFYBP25208 207 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 CNTFRP26992 372 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 HCCSP53701 268 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 SLURP1P55000 103 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 ISL1P61371 349 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 AESQ08117 197 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 EBI3Q14213 229 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 C17orf58Q2M2W7 97 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 SAMD4BQ5PRF9 694 aaKnown RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 C8orf82Q6P1X6 216 aaPredicted RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 HDXQ7Z353 690 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 SGPP2Q8IWX5 399 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR8H3Q8N146 312 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 Q8N6K4 173 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR2T33Q8NG76 320 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR4D6Q8NGJ1 314 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 EMG1Q92979 244 aaKnown RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 EAF1Q96JC9 268 aaPredicted RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 ATP6V1G3Q96LB4 118 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 KCTD7Q96MP8 289 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 KCTD14Q9BQ13 255 aaPredicted RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 HSPB9Q9BQS6 159 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 SIKE1Q9BRV8 207 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR51V1Q9H2C8 321 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 RETNQ9HD89 108 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 CMC2Q9NRP2 79 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 ARGLU1Q9NWB6 273 aaPredicted RBP8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 ZNF446Q9NWS9 450 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 GLS2Q9UI32 602 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 V9GYS6 101 aa8.05□□□□□ -1.12
CTDNEP1-202ENST00000570380 SIRPB1O00241 398 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 SOX14O95416 240 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 CALCBP10092 127 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 VDAC1P21796 283 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 PTGFRP43088 359 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 NPBWR2P48146 333 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 RAB7AP51149 207 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 MADCAM1Q13477 382 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 SLC25A26Q70HW3 274 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 HAPLN4Q86UW8 402 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 ENTHD1Q8IYW4 607 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 RPP25LQ8N5L8 163 aaKnown RBP8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 OR14K1Q8NGZ2 314 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 ARPC1AQ92747 370 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 LEAP2Q969E1 77 aa8.04□□□□□ -1.12
CTDNEP1-202ENST00000570380 PYURFQ96I23 114 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms