RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ZNF281Q9Y2X9 895 aa10.63□□□□□ -0.71
CNOT1-220ENST00000569916 SF3B6Q9Y3B4 125 aaKnown RBP10.63□□□□□ -0.71
CNOT1-220ENST00000569916 hCG_1809904A0A1W2PP81 198 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 A0A1W2PPE2 198 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 A0A1W2PR64 198 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 A0A1W2PRV1 198 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 H0YJX3 145 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 SIRPB1O00241 398 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 GABRPO00591 440 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 TMEM225BP0DP42 221 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 C21orf33P30042 268 aaPredicted RBP10.62□□□□□ -0.71
CNOT1-220ENST00000569916 OR3A1P47881 315 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 BMXP51813 675 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 RPS11P62280 158 aaKnown RBP eCLIP10.62□□□□□ -0.71
CNOT1-220ENST00000569916 MEF2CQ06413 473 aaPredicted RBP10.62□□□□□ -0.71
CNOT1-220ENST00000569916 TAF9Q16594 264 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 MIDNQ504T8 468 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 ZNF782Q6ZMW2 699 aaPredicted RBP10.62□□□□□ -0.71
CNOT1-220ENST00000569916 STX19Q8N4C7 294 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 TPRX1Q8N7U7 411 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 PXT1Q8NFP0 134 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 C17orf50Q8WW18 174 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 GHSRQ92847 366 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 ORAI1Q96D31 301 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 CPNE2Q96FN4 548 aaPredicted RBP10.62□□□□□ -0.71
CNOT1-220ENST00000569916 AJUBAQ96IF1 538 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 GLS2Q9UI32 602 aa10.62□□□□□ -0.71
CNOT1-220ENST00000569916 SH2D1BO14796 132 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 MGST3O14880 152 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 MYL12BO14950 172 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 MAGEB3O15480 346 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 PAHP00439 452 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 RBP4P02753 201 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 ZNF728P0DKX0 622 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 OMGP23515 440 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 COX7A1P24310 79 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 LMO1P25800 156 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 MTNR1BP49286 362 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 WNT4P56705 351 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 TAS2R43P59537 309 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 RELBQ01201 579 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 Q499Y3 187 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 YIF1BQ5BJH7 314 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 Q6P435 159 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 BEND2Q8NDZ0 799 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 PPP1R35Q8TAP8 253 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 TNFAIP8L1Q8WVP5 186 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 DYRK2Q92630 601 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 ZNF714Q96N38 554 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 GPER1Q99527 375 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 NKX3-1Q99801 234 aaPredicted RBP10.61□□□□□ -0.71
CNOT1-220ENST00000569916 DPAGT1Q9H3H5 408 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 HEXA-AS1Q9H8Q6 139 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 C1RLQ9NZP8 487 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 PCDHGB5Q9Y5G0 923 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 LINC00312Q9Y6C7 94 aa10.61□□□□□ -0.71
CNOT1-220ENST00000569916 PNMA8CA0A1B0GUJ8 204 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 hADV38S2A0JD32 116 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 GPR137BO60478 399 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 ALDOBP05062 364 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 IGHV1-8P0DP01 117 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 ZNF44P15621 663 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 IGFBP3P17936 291 aaPredicted RBP10.6□□□□□ -0.71
CNOT1-220ENST00000569916 MDKP21741 143 aaPredicted RBP10.6□□□□□ -0.71
CNOT1-220ENST00000569916 ERP29P30040 261 aaKnown RBP10.6□□□□□ -0.71
CNOT1-220ENST00000569916 OR3A4PP47883 348 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 P2RX3P56373 397 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 RPL15P61313 204 aaKnown RBP10.6□□□□□ -0.71
CNOT1-220ENST00000569916 PPP3R1P63098 170 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 C6orf141Q5SZD1 244 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 DDI2Q5TDH0 399 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 ELP2Q6IA86 826 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 SATL1Q86VE3 508 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 NANOGP1Q8N7R0 232 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 ZNF747Q9BV97 191 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 PPA2Q9H2U2 334 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 TMEM138Q9NPI0 162 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 VPREB3Q9UKI3 123 aa10.6□□□□□ -0.71
CNOT1-220ENST00000569916 TRAV8-7A0A075B6U6 113 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 TRBV5-7A0A0A0MS05 114 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 A0A0G2JK05 382 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 MAGEA13PA6NCF6 341 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 ODF3BA8MYP8 253 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 SLC33A1O00400 549 aaPredicted RBP10.59□□□□□ -0.71
CNOT1-220ENST00000569916 GPX5O75715 221 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 NDUFA7O95182 113 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 CRYBA1P05813 215 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 CSN2P05814 226 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 CDK1P06493 297 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 FSTP19883 344 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 BDKRB2P30411 391 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 RAG2P55895 527 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 SCN1BQ07699 218 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 RIPK1Q13546 671 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 RNLSQ5VYX0 342 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 ASCL4Q6XD76 172 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 CHST4Q8NCG5 386 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 Q8NFD4 153 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 OR51T1Q8NGJ9 327 aa10.59□□□□□ -0.71
CNOT1-220ENST00000569916 OR10K1Q8NGX5 313 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms