RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 OR10K2Q6IF99 312 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 SFXN4Q6P4A7 337 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 LINC00596Q86U02 117 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 FGFRL1Q8N441 504 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 ASCC1Q8N9N2 400 aaKnown RBP13.9□□□□□ -0.18
COMMD4-224ENST00000568877 TMEM185AQ8NFB2 350 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 KCNG3Q8TAE7 436 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 ST8SIA4Q92187 359 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 SMR3AQ99954 134 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 SELENOIQ9C0D9 397 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 FAM234AQ9H0X4 552 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 KCNK15Q9H427 330 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 POLR3KQ9Y2Y1 108 aaPredicted RBP13.9□□□□□ -0.18
COMMD4-224ENST00000568877 MAST4O15021 2626 aa13.9□□□□□ -0.18
COMMD4-224ENST00000568877 TMEM82A0PJX8 343 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 TMEM14DPA8MWL7 114 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 K7N7A8 449 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 GEMIN2O14893 280 aaKnown RBP13.89□□□□□ -0.19
COMMD4-224ENST00000568877 CD5LO43866 347 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 MPIG6BO95866 241 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 IL1AP01583 271 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 TK1P04183 234 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 SLC2A2P11168 524 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-224ENST00000568877 ZNF16P17020 682 aaPredicted RBP13.89□□□□□ -0.19
COMMD4-224ENST00000568877 RPS19P39019 145 aaKnown RBP13.89□□□□□ -0.19
COMMD4-224ENST00000568877 SERPINB10P48595 397 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 UNC119Q13432 240 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 MPV17LQ2QL34 196 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 CD276Q5ZPR3 534 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 C17orf107Q6ZR85 190 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 OR2W3Q7Z3T1 314 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 BIVMQ86UB2 503 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 CHST4Q8NCG5 386 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 SNX22Q96L94 193 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 LIN7BQ9HAP6 207 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 OR5V1Q9UGF6 321 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 DAPK2Q9UIK4 370 aa13.89□□□□□ -0.19
COMMD4-224ENST00000568877 FLNAP21333 2647 aaKnown RBP13.89□□□□□ -0.19
COMMD4-224ENST00000568877 LOC105371242A0A075B767 164 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 TRAV20A0A0B4J274 112 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 PSPNO60542 156 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 OR7C1O76099 320 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-224ENST00000568877 ECDO95905 644 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-224ENST00000568877 NDUFB7P17568 137 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 GABRR1P24046 479 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 DVL1P1P54792 670 aaPredicted RBP13.88□□□□□ -0.19
COMMD4-224ENST00000568877 TMBIM6P55061 237 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 TAF9Q16594 264 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 C11orf91Q3C1V1 193 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 BTN2A1Q7KYR7 527 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 GLCCI1Q86VQ1 547 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 PPP1R35Q8TAP8 253 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 RAB2BQ8WUD1 216 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 TMEM186Q96B77 213 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 Q96M66 194 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 TMEM59Q9BXS4 323 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 SHARPINQ9H0F6 387 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 IFT22Q9H7X7 185 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 FBLN5Q9UBX5 448 aa13.88□□□□□ -0.19
COMMD4-224ENST00000568877 A0A0B4J203 849 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 PPIAL4CA0A0B4J2A2 164 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A10PA6NDY2 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A18PA6NE21 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A16PA6NEW6 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A20PA6NIJ5 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A8PA6NJQ4 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A7PA6NKC0 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A22PA8MWA6 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A12PA8MX19 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A5PA8MXJ8 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A23PA8MXZ1 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 C22orf46C9J442 243 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 SLC33A1O00400 549 aaPredicted RBP13.87□□□□□ -0.19
COMMD4-224ENST00000568877 LDLRAD4O15165 306 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 LY6G6DO95868 133 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A15PP0C7V4 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A13PP0C7W8 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A14PP0C7W9 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 FAM90A24PP0C7X0 464 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 RPS27AP62979 156 aaKnown RBP13.87□□□□□ -0.19
COMMD4-224ENST00000568877 CROCCP3Q8IVE0 287 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 OR8H2Q8N162 312 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 OR4S1Q8NGB4 309 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 OR5D13Q8NGL4 314 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 H1FXQ92522 213 aaKnown RBP13.87□□□□□ -0.19
COMMD4-224ENST00000568877 POM121Q96HA1 1249 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 BCL7BQ9BQE9 202 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 CHST6Q9GZX3 395 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 MMP26Q9NRE1 261 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 HIF1ANQ9NWT6 349 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 ZNF581Q9P0T4 197 aa13.87□□□□□ -0.19
COMMD4-224ENST00000568877 TRAV24A0A0B4J272 114 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 TMEM272A0A1B0GTI8 110 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 TMEM127O75204 238 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 OR3A1P47881 315 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 PAX2Q02962 417 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 GRK1Q15835 563 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 IDNKQ5T6J7 187 aa13.86□□□□□ -0.19
COMMD4-224ENST00000568877 METAP1DQ6UB28 335 aaPredicted RBP13.86□□□□□ -0.19
COMMD4-224ENST00000568877 CLEC9AQ6UXN8 241 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms