RNA–Protein interactions for RNA: ENST00000568605.5

CLK3-224, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-224ENST00000568605 CDH26Q8IXH8 852 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 JAGN1Q8N5M9 183 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 ZFAND2BQ8WV99 257 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 C22orf15Q8WYQ4 148 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 LHX4Q969G2 390 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 SLITRK2Q9H156 845 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 METTL9Q9H1A3 318 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 TCF7L1Q9HCS4 588 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 IL36GQ9NZH8 169 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 IL36RNQ9UBH0 155 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 CUBNO60494 3623 aa10.7□□□□□ -0.7
CLK3-224ENST00000568605 TRAV8-7A0A075B6U6 113 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 IGHV1-69DA0A0B4J2H0 117 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 MEGF11A6BM72 1044 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 SIRPB1O00241 398 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 MGST3O14880 152 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 RRP9O43818 475 aaKnown RBP10.69□□□□□ -0.7
CLK3-224ENST00000568605 RGS9O75916 674 aaPredicted RBP10.69□□□□□ -0.7
CLK3-224ENST00000568605 HTR3BO95264 441 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 OR2H2O95918 312 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 IGHV1-69P01742 117 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 MAS1P04201 325 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 PTGFRP43088 359 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 OR3A4PP47883 348 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 MEF2CQ06413 473 aaPredicted RBP10.69□□□□□ -0.7
CLK3-224ENST00000568605 EDDM3AQ14507 147 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 ACSM3Q53FZ2 586 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 AWAT2Q6E213 333 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 CRIP3Q6Q6R5 217 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 BRD3OSQ6XYD6 125 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 LINC00596Q86U02 117 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 MGLLQ99685 303 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 YTHDF1Q9BYJ9 559 aaKnown RBP10.69□□□□□ -0.7
CLK3-224ENST00000568605 NOX4Q9NPH5 578 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 SIRT7Q9NRC8 400 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 C19orf12Q9NSK7 152 aa10.69□□□□□ -0.7
CLK3-224ENST00000568605 CENPVL3A0A0U1RRI6 287 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 A0A1W2PPK0 400 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 hADV38S2A0JD32 116 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 ARL6IP5O75915 188 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 RBP4P02753 201 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 CSN2P05814 226 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 CALCBP10092 127 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 CPEP16870 476 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 SERPINA2P20848 420 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 DUSP1P28562 367 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 ERVFRD-1P60508 538 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 TPBGQ13641 420 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 HSD17B12Q53GQ0 312 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 SIGLECL1Q8N7X8 197 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 OR4M1Q8NGD0 313 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 OR51T1Q8NGJ9 327 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 PHYHIPQ92561 330 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 FCGR1BQ92637 280 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 ZDHHC16Q969W1 377 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 ORAI1Q96D31 301 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 ZNF714Q96N38 554 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 UQCC2Q9BRT2 126 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 CHST6Q9GZX3 395 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 UNKLQ9H9P5 680 aaKnown RBP10.68□□□□□ -0.7
CLK3-224ENST00000568605 ING4Q9UNL4 249 aa10.68□□□□□ -0.7
CLK3-224ENST00000568605 MRPS28Q9Y2Q9 187 aaKnown RBP10.68□□□□□ -0.7
CLK3-224ENST00000568605 TMEM82A0PJX8 343 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 MAGEA13PA6NCF6 341 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 DEGS1O15121 323 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 CDRT1O95170 752 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 PRTN3P24158 256 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 LMO1P25800 156 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 ERP29P30040 261 aaKnown RBP10.67□□□□□ -0.7
CLK3-224ENST00000568605 GABRA5P31644 462 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 RANBP1P43487 201 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 MAP2K4P45985 399 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 OR3A1P47881 315 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 KCNJ3P48549 501 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 SCN1BQ07699 218 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 MPV17LQ2QL34 196 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 NHLRC3Q5JS37 347 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 GLT8D1Q68CQ7 371 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 ASCL4Q6XD76 172 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 C17orf107Q6ZR85 190 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 RNF144BQ7Z419 303 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 TRAPPC6BQ86SZ2 158 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 OSR2Q8N2R0 312 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 MUL1Q969V5 352 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 FOXRED1Q96CU9 486 aaPredicted RBP10.67□□□□□ -0.7
CLK3-224ENST00000568605 MRPS24Q96EL2 167 aaKnown RBP10.67□□□□□ -0.7
CLK3-224ENST00000568605 PPA2Q9H2U2 334 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 HEXA-AS1Q9H8Q6 139 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 ACOT13Q9NPJ3 140 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 LINC00312Q9Y6C7 94 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 COL6A5A8TX70 2615 aa10.67□□□□□ -0.7
CLK3-224ENST00000568605 PSPNO60542 156 aa10.66□□□□□ -0.7
CLK3-224ENST00000568605 UBBP0CG47 229 aa10.66□□□□□ -0.7
CLK3-224ENST00000568605 ZNF728P0DKX0 622 aa10.66□□□□□ -0.7
CLK3-224ENST00000568605 GTF2F2P13984 249 aa10.66□□□□□ -0.7
CLK3-224ENST00000568605 P2RX3P56373 397 aa10.66□□□□□ -0.7
CLK3-224ENST00000568605 RBM11P57052 281 aaKnown RBP10.66□□□□□ -0.7
CLK3-224ENST00000568605 BAMBIQ13145 260 aa10.66□□□□□ -0.7
CLK3-224ENST00000568605 ZNF273Q14593 569 aa10.66□□□□□ -0.7
CLK3-224ENST00000568605 KRTAP24-1Q3LI83 254 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms