RNA–Protein interactions for RNA: ENST00000567992.1

CLK3-220, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 603 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-220ENST00000567992 MAGEB3O15480 346 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 TCF21O43680 179 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 CDRT1O95170 752 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 VENTXO95231 258 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 OR2H2O95918 312 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 CPEP16870 476 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 LMO1P25800 156 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 PTGFRP43088 359 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 MTNR1BP49286 362 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 DLX6P56179 175 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 HILS1P60008 231 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 RPL31P62899 125 aaKnown RBP8.04□□□□□ -1.12
CLK3-220ENST00000567992 PRB3Q04118 309 aaPredicted RBP8.04□□□□□ -1.12
CLK3-220ENST00000567992 EMX1Q04741 257 aaPredicted RBP8.04□□□□□ -1.12
CLK3-220ENST00000567992 SCGB2A2Q13296 93 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 SSX1Q16384 188 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 KRTAP24-1Q3LI83 254 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 ACSM3Q53FZ2 586 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 TMEM200BQ69YZ2 307 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 HCP5Q6MZN7 132 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 FIP1L1Q6UN15 594 aaKnown RBP8.04□□□□□ -1.12
CLK3-220ENST00000567992 BRD3OSQ6XYD6 125 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 TMEM91Q6ZNR0 172 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 ZNF367Q7RTV3 350 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 LRRTM1Q86UE6 522 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 FAM185AQ8N0U4 392 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 BPIFB2Q8N4F0 458 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 OR4S1Q8NGB4 309 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 OR4M1Q8NGD0 313 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 OR51T1Q8NGJ9 327 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 OR10K1Q8NGX5 313 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 THRSPQ92748 146 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 GPER1Q99527 375 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 MGLLQ99685 303 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 CHST6Q9GZX3 395 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 ZNF696Q9H7X3 374 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 UNKLQ9H9P5 680 aaKnown RBP8.04□□□□□ -1.12
CLK3-220ENST00000567992 SIRT7Q9NRC8 400 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 NDUFA13Q9P0J0 144 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 CKLFQ9UBR5 152 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 GSTK1Q9Y2Q3 226 aa8.04□□□□□ -1.12
CLK3-220ENST00000567992 MDFIC2A0A1B0GVS7 189 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 A0A1W2PP11 408 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 A0A1W2PQ09 198 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 RNASEK-C17orf49H0YIS7 233 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 SLC33A1O00400 549 aaPredicted RBP8.03□□□□□ -1.12
CLK3-220ENST00000567992 MRPS14O60783 128 aaKnown RBP8.03□□□□□ -1.12
CLK3-220ENST00000567992 MAS1P04201 325 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 UCHL1P09936 223 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 HSMCR30P0CW71 290 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 CCL3L1P16619 93 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 EEF1B2P24534 225 aaKnown RBP8.03□□□□□ -1.12
CLK3-220ENST00000567992 MAPK3P27361 379 aaPredicted RBP8.03□□□□□ -1.12
CLK3-220ENST00000567992 KLRD1Q13241 179 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 PDCD1Q15116 288 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 PIGYQ3MUY2 71 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 NHLRC3Q5JS37 347 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 FOXB2Q5VYV0 432 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 METAP1DQ6UB28 335 aaPredicted RBP8.03□□□□□ -1.12
CLK3-220ENST00000567992 C1orf122Q6ZSJ8 110 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 PHC2Q8IXK0 858 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 SPARTQ8N0X7 666 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 SIGLECL1Q8N7X8 197 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 ZDHHC22Q8N966 263 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 OR4D6Q8NGJ1 314 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 LHX4Q969G2 390 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 TMEM203Q969S6 136 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 MUL1Q969V5 352 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 SNX22Q96L94 193 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 EXOSC4Q9NPD3 245 aaKnown RBP8.03□□□□□ -1.12
CLK3-220ENST00000567992 ZNF581Q9P0T4 197 aa8.03□□□□□ -1.12
CLK3-220ENST00000567992 A0A0A6YYJ9 748 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 TRAV24A0A0B4J272 114 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 IGHV1-69DA0A0B4J2H0 117 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 A0A0G2JK05 382 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 SMIM31A0A1B0GVY4 71 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 MEX3AA1L020 520 aaKnown RBP8.02□□□□□ -1.13
CLK3-220ENST00000567992 TNFAIP8O95379 198 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 IGHV1-69P01742 117 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 CSN2P05814 226 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 SMIM18P0DKX4 95 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 CD37P11049 281 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 GABRR1P24046 479 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 PRTN3P24158 256 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 FPR2P25090 351 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 BMXP51813 675 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 P2RX3P56373 397 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 ERVFRD-1P60508 538 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 FABP5Q01469 135 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 EDDM3AQ14507 147 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 IL13RA2Q14627 380 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 RSU1Q15404 277 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 GRK1Q15835 563 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 GPR157Q5UAW9 335 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 UBE2UQ5VVX9 321 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 CEACAM19Q7Z692 300 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 CDH26Q8IXH8 852 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 PDZD9Q8IXQ8 264 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 CMTM4Q8IZR5 234 aa8.02□□□□□ -1.13
CLK3-220ENST00000567992 JAGN1Q8N5M9 183 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms