RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 CHST4Q8NCG5 386 aa22.26■■□□□ 1.15
UBFD1-206ENST00000566669 OR52N4Q8NGI2 321 aa22.26■■□□□ 1.15
UBFD1-206ENST00000566669 ADAT3Q96EY9 351 aaPredicted RBP22.26■■□□□ 1.15
UBFD1-206ENST00000566669 OPALINQ96PE5 141 aa22.26■■□□□ 1.15
UBFD1-206ENST00000566669 CHST6Q9GZX3 395 aa22.26■■□□□ 1.15
UBFD1-206ENST00000566669 EXOSC4Q9NPD3 245 aaKnown RBP22.26■■□□□ 1.15
UBFD1-206ENST00000566669 DAPL1A0PJW8 107 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 PSPNO60542 156 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 CIB2O75838 187 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 INMTO95050 263 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 CD28P10747 220 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 BCL3P20749 454 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 NPBWR2P48146 333 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 HABP2Q14520 560 aaPredicted RBP22.25■■□□□ 1.15
UBFD1-206ENST00000566669 LDLRAD2Q5SZI1 272 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 HEPN1Q6WQI6 88 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 SAXO1Q8IYX7 474 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 CORO2AQ92828 525 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 FGGYQ96C11 551 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 R3HDM4Q96D70 268 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 DPM3Q9P2X0 92 aa22.25■■□□□ 1.15
UBFD1-206ENST00000566669 DSCAML1Q8TD84 2053 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 IGKV1-9A0A0C4DH69 117 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 SLC16A6O15403 523 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 CSN2P05814 226 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 LMO1P25800 156 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 CEACAM3P40198 252 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 OR3A1P47881 315 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 BDH1Q02338 343 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 RDH10Q8IZV5 341 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 HRASLS5Q96KN8 279 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 COMMD4Q9H0A8 199 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 LIN7BQ9HAP6 207 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 FAM53CQ9NYF3 392 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 FRRS1LQ9P0K9 344 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 PLXNB1O43157 2135 aa22.24■■□□□ 1.15
UBFD1-206ENST00000566669 HTR1AP08908 422 aa22.23■■□□□ 1.15
UBFD1-206ENST00000566669 SNRPGP62308 76 aaKnown RBP22.23■■□□□ 1.15
UBFD1-206ENST00000566669 ABHD12Q8N2K0 398 aa22.23■■□□□ 1.15
UBFD1-206ENST00000566669 ACBD7Q8N6N7 88 aa22.23■■□□□ 1.15
UBFD1-206ENST00000566669 TPRX1Q8N7U7 411 aa22.23■■□□□ 1.15
UBFD1-206ENST00000566669 OR4P4Q8NGL7 312 aa22.23■■□□□ 1.15
UBFD1-206ENST00000566669 MEX3AA1L020 520 aaKnown RBP22.22■■□□□ 1.15
UBFD1-206ENST00000566669 LEUTXA8MZ59 168 aa22.22■■□□□ 1.15
UBFD1-206ENST00000566669 KDM4BO94953 1096 aa22.22■■□□□ 1.15
UBFD1-206ENST00000566669 RNF166Q96A37 237 aaPredicted RBP22.22■■□□□ 1.15
UBFD1-206ENST00000566669 RNFT2Q96EX2 444 aa22.22■■□□□ 1.15
UBFD1-206ENST00000566669 CPNE2Q96FN4 548 aaPredicted RBP22.22■■□□□ 1.15
UBFD1-206ENST00000566669 CITED2Q99967 270 aaPredicted RBP22.22■■□□□ 1.15
UBFD1-206ENST00000566669 IL36RNQ9UBH0 155 aa22.22■■□□□ 1.15
UBFD1-206ENST00000566669 J3QRE1 110 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 ALX3O95076 343 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 OR2H2O95918 312 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 DUSP1P28562 367 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 CD34P28906 385 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 BLCAPP62952 87 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 MRPL28Q13084 256 aaKnown RBP22.21■■□□□ 1.15
UBFD1-206ENST00000566669 KPNB1Q14974 876 aaKnown RBP22.21■■□□□ 1.15
UBFD1-206ENST00000566669 OR13C3Q8NGS6 347 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 STMN2Q93045 179 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 MMP28Q9H239 520 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 NECAP2Q9NVZ3 263 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 GSTK1Q9Y2Q3 226 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 NOTCH3Q9UM47 2321 aa22.21■■□□□ 1.15
UBFD1-206ENST00000566669 OOSP1A8MZH6 123 aa22.2■■□□□ 1.14
UBFD1-206ENST00000566669 M0QZK8 103 aa22.2■■□□□ 1.14
UBFD1-206ENST00000566669 PIN1P1O15428 100 aa22.2■■□□□ 1.14
UBFD1-206ENST00000566669 DBTP11182 482 aaKnown RBP22.2■■□□□ 1.14
UBFD1-206ENST00000566669 CCDC144NLQ6NUI1 221 aa22.2■■□□□ 1.14
UBFD1-206ENST00000566669 OR4D6Q8NGJ1 314 aa22.2■■□□□ 1.14
UBFD1-206ENST00000566669 HAVCR2Q8TDQ0 301 aa22.2■■□□□ 1.14
UBFD1-206ENST00000566669 SIRPB1O00241 398 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 ALPLP05186 524 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 CDK2P24941 298 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 PRRX1P54821 245 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 OR5D14Q8NGL3 314 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 OCSTAMPQ9BR26 566 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 PCDHB16Q9NRJ7 776 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 OR6C3Q9NZP0 311 aa22.19■■□□□ 1.14
UBFD1-206ENST00000566669 SAC3D1A6NKF1 404 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 TOR1AO14656 332 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 IGLV1-47P01700 117 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 PTGFRP43088 359 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 CD83Q01151 205 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 LYG1Q8N1E2 194 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 OR5AU1Q8NGC0 362 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 OR5M11Q96RB7 305 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 ZCCHC4Q9H5U6 513 aa22.18■■□□□ 1.14
UBFD1-206ENST00000566669 EXOGQ9Y2C4 368 aaKnown RBP22.18■■□□□ 1.14
UBFD1-206ENST00000566669 A0A087X0M5 115 aa22.17■■□□□ 1.14
UBFD1-206ENST00000566669 A0A1B0GX30 115 aa22.17■■□□□ 1.14
UBFD1-206ENST00000566669 ODAMA1E959 279 aa22.17■■□□□ 1.14
UBFD1-206ENST00000566669 ZNF729A6NN14 1252 aaPredicted RBP22.17■■□□□ 1.14
UBFD1-206ENST00000566669 ADARB2-AS1A8MUL3 147 aa22.17■■□□□ 1.14
UBFD1-206ENST00000566669 ZNF44P15621 663 aa22.17■■□□□ 1.14
UBFD1-206ENST00000566669 MNDAP41218 407 aa22.17■■□□□ 1.14
UBFD1-206ENST00000566669 SNU13P55769 128 aaKnown RBP22.17■■□□□ 1.14
UBFD1-206ENST00000566669 NANOS3P60323 173 aaKnown RBP22.17■■□□□ 1.14
UBFD1-206ENST00000566669 ALKBH1Q13686 389 aaKnown RBP22.17■■□□□ 1.14
UBFD1-206ENST00000566669 CENPVQ7Z7K6 275 aaPredicted RBP22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms