RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 ZNF529Q6P280 563 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 Q6P435 159 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 OR5AK2Q8NH90 309 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 CNIH3Q8TBE1 160 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 MRPL48Q96GC5 212 aaKnown RBP11.85□□□□□ -0.51
FANCA-220ENST00000566409 ZNF714Q96N38 554 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 RDH12Q96NR8 316 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 JAM3Q9BX67 310 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 COMMD4Q9H0A8 199 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 FBLN5Q9UBX5 448 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 LINC00312Q9Y6C7 94 aa11.85□□□□□ -0.51
FANCA-220ENST00000566409 SIRT4Q9Y6E7 314 aaPredicted RBP11.85□□□□□ -0.51
FANCA-220ENST00000566409 MGST3O14880 152 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 KCNAB3O43448 404 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 ARG1P05089 322 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 JUNBP17275 347 aaPredicted RBP11.84□□□□□ -0.51
FANCA-220ENST00000566409 ERP29P30040 261 aaKnown RBP11.84□□□□□ -0.51
FANCA-220ENST00000566409 GBX2P52951 348 aaPredicted RBP11.84□□□□□ -0.51
FANCA-220ENST00000566409 P2RX3P56373 397 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 CDK5R1Q15078 307 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 KISS1Q15726 138 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 ZSCAN26Q16670 478 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 LRRC36Q1X8D7 754 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 PLA1AQ53H76 456 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 ZNF691Q5VV52 312 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 CCBE1Q6UXH8 406 aaPredicted RBP11.84□□□□□ -0.51
FANCA-220ENST00000566409 BAIAP2L2Q6UXY1 529 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 SERPINA12Q8IW75 414 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 SAXO1Q8IYX7 474 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 ZNF555Q8NEP9 628 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 OR51A2Q8NGJ7 313 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 OR5D14Q8NGL3 314 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 OR13D1Q8NGV5 346 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 RPS4Y2Q8TD47 263 aa11.84□□□□□ -0.51
FANCA-220ENST00000566409 A0A0G2JK05 382 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 SH2D1BO14796 132 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 SULT1B1O43704 296 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 LALBAP00709 142 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 CCDC159P0C7I6 412 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 OCM2P0CE71 109 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 OCMP0CE72 109 aaPredicted RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 GABRA5P31644 462 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 GLIPR1P48060 266 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 MRPL28Q13084 256 aaKnown RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 SSX2Q16385 188 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 OR2G6Q5TZ20 316 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 MYCBPQ99417 103 aaPredicted RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 NKX3-1Q99801 234 aaPredicted RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 TCF7L1Q9HCS4 588 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 EXOSC4Q9NPD3 245 aaKnown RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 CLEC2DQ9UHP7 191 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 DHDHQ9UQ10 334 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 TBL2Q9Y4P3 447 aaKnown RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 SESN1Q9Y6P5 492 aa11.83□□□□□ -0.52
FANCA-220ENST00000566409 PRKDCP78527 4128 aaKnown RBP11.83□□□□□ -0.52
FANCA-220ENST00000566409 TET2Q6N021 2002 aaPredicted RBP11.82□□□□□ -0.52
FANCA-220ENST00000566409 IGHV2-26A0A0B4J1V2 119 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 SLC33A1O00400 549 aaPredicted RBP11.82□□□□□ -0.52
FANCA-220ENST00000566409 HCKP08631 526 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 TMEM225BP0DP42 221 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 DCKP27707 260 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 GDNFP39905 211 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 KIR2DS4P43632 304 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 SOX2P48431 317 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 EFNB2P52799 333 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 ADARB1P78563 741 aaKnown RBP11.82□□□□□ -0.52
FANCA-220ENST00000566409 SCN1BQ07699 218 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 AESQ08117 197 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 UTF1Q5T230 341 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 HIST2H2BDQ6DRA6 164 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 TSEN15Q8WW01 171 aaKnown RBP11.82□□□□□ -0.52
FANCA-220ENST00000566409 STMN2Q93045 179 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 MALSU1Q96EH3 234 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 COQ2Q96H96 371 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 TMEM133Q9H2Q1 129 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 RHOFQ9HBH0 211 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 NEK6Q9HC98 313 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 GLS2Q9UI32 602 aa11.82□□□□□ -0.52
FANCA-220ENST00000566409 DYNC1I2Q13409 638 aaKnown RBP11.81□□□□□ -0.52
FANCA-220ENST00000566409 FAM189A2Q15884 450 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 CCDC58Q4VC31 144 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 ELP2Q6IA86 826 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 LAIR2Q6ISS4 152 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 RPL22L1Q6P5R6 122 aaKnown RBP11.81□□□□□ -0.52
FANCA-220ENST00000566409 ZNF485Q8NCK3 441 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 CYGBQ8WWM9 190 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 CORO2AQ92828 525 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 ORAI1Q96D31 301 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 TAS2R4Q9NYW5 299 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 DIMT1Q9UNQ2 313 aaKnown RBP11.81□□□□□ -0.52
FANCA-220ENST00000566409 FOXJ3Q9UPW0 622 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 TCF19Q9Y242 345 aa11.81□□□□□ -0.52
FANCA-220ENST00000566409 UBE2J1Q9Y385 318 aaPredicted RBP11.81□□□□□ -0.52
FANCA-220ENST00000566409 ODAMA1E959 279 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 A6NDX4 124 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 M0QZ24 198 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 GABRPO00591 440 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 TIMM23O14925 209 aa11.8□□□□□ -0.52
FANCA-220ENST00000566409 DEGS1O15121 323 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms