RNA–Protein interactions for RNA: ENST00000565912.1

CX3CL1-204, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

TSL 1 (best) BASIC

Gene CX3CL1, Length 5,796 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-204ENST00000565912 APOBEC4Q8WW27 367 aaKnown RBP12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 PCOLCE2Q9UKZ9 415 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 ST3GAL2Q16842 350 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 LILRA6Q6PI73 481 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 C5orf17Q8NAS9 161 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 FAM60AQ9NP50 221 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 MMP26Q9NRE1 261 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 GPR27Q9NS67 375 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 SLC7A10Q9NS82 523 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 KCNE1BA0A087WTH5 132 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 CDK2AP1O14519 115 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 DNPH1O43598 174 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 GNG7O60262 68 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 PNPP00491 289 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 PDPNQ86YL7 162 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 ZMAT5Q9UDW3 170 aaKnown RBP12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 TCFL5Q9UL49 500 aa12.04□□□□□ -0.48
CX3CL1-204ENST00000565912 IGLV3-16A0A075B6K0 115 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 CSN3P07498 182 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 CTF1Q16619 201 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 GVQW1Q8N7I0 195 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 SAP30LQ9HAJ7 183 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 TRAV34A0A0B4J273 112 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 CLDN34H7C241 214 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 ZNF154Q13106 437 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 RBPMS2Q6ZRY4 209 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 TMEM116Q8NCL8 245 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 R3HDM4Q96D70 268 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 SIRT3Q9NTG7 399 aaPredicted RBP12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 EXOGQ9Y2C4 368 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 TBX19O60806 448 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 RAC3P60763 192 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 FOXB2Q5VYV0 432 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 RHBDD2Q6NTF9 364 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 OR8B12Q8NGG6 310 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 OR1L1Q8NH94 360 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 VSTM2AQ8TAG5 236 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 ADTRPQ96IZ2 230 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 RSRP1Q9BUV0 290 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 MARF1Q9Y4F3 1742 aaKnown RBP12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 M0R296 226 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 EML2O95834 649 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 PRSS1P07477 247 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 CCL4P13236 92 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 THSD4Q6ZMP0 1018 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 DUSP18Q8NEJ0 188 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 WDR13Q9H1Z4 485 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 GLRX2Q9NS18 164 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 PRR35P0CG20 571 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 FGF9P31371 208 aaPredicted RBP12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 ZNF141Q15928 474 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 ZBTB37Q5TC79 503 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 FAM78BQ5VT40 261 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 UQCC3Q6UW78 93 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 VN1R4Q7Z5H5 301 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 VSTM2LQ96N03 204 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 TMUB1Q9BVT8 246 aa12.03□□□□□ -0.48
CX3CL1-204ENST00000565912 G6PCP35575 357 aa12.02□□□□□ -0.48
CX3CL1-204ENST00000565912 OR6X1Q8NH79 312 aa12.02□□□□□ -0.48
CX3CL1-204ENST00000565912 ASB10Q8WXI3 467 aa12.02□□□□□ -0.48
CX3CL1-204ENST00000565912 PTP4A1Q93096 173 aa12.02□□□□□ -0.48
CX3CL1-204ENST00000565912 MAP6Q96JE9 813 aa12.02□□□□□ -0.48
CX3CL1-204ENST00000565912 KIAA0100Q14667 2235 aaKnown RBP12.02□□□□□ -0.48
CX3CL1-204ENST00000565912 GSTZ1O43708 216 aaPredicted RBP12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 HOXC4P09017 264 aaPredicted RBP12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 CRYBB2P43320 205 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 IL13RA2Q14627 380 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 FDX2Q6P4F2 183 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 OR10D4PQ8NGN7 298 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 PTPMT1Q8WUK0 201 aaPredicted RBP12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 RASL10BQ96S79 203 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 KCNK15Q9H427 330 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 SRD5A3Q9H8P0 318 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 UBR3Q6ZT12 1888 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 ADAM11O75078 769 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 ACP1P24666 158 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 ZNF770Q6IQ21 691 aaPredicted RBP12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 C17orf47Q8NEP4 570 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 OR2Y1Q8NGV0 311 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 ATP5SQ99766 215 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 LPAR2Q9HBW0 351 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 AP5S1Q9NUS5 200 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 TINAGQ9UJW2 476 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 CDIPTO14735 213 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 POLR2GP62487 172 aaKnown RBP eCLIP12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 IQCJQ1A5X6 159 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 TBC1D26Q86UD7 250 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 CLRN3Q8NCR9 226 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 KCNMB2Q9Y691 235 aa12.02□□□□□ -0.49
CX3CL1-204ENST00000565912 HAND1O96004 215 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 RPS4Y1P22090 263 aaKnown RBP12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 ATP6V1FQ16864 119 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 WFDC3Q8IUB2 231 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 PCDHGA9Q9Y5G4 932 aaKnown RBP12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 MPC2O95563 127 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 BCL3P20749 454 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 PSMB2P49721 201 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 CARFQ8N187 725 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 C1RLQ9NZP8 487 aa12.01□□□□□ -0.49
CX3CL1-204ENST00000565912 TTRP02766 147 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms