RNA–Protein interactions for RNA: ENST00000564703.1

RAB40C-208, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 921 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-208ENST00000564703 SLC22A6Q4U2R8 563 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 AWAT2Q6E213 333 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 OSR2Q8N2R0 312 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 FGFRL1Q8N441 504 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 CHST4Q8NCG5 386 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 NKX3-1Q99801 234 aaPredicted RBP13.22□□□□□ -0.29
RAB40C-208ENST00000564703 PCGF1Q9BSM1 259 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 PPIL3Q9H2H8 161 aaKnown RBP13.22□□□□□ -0.29
RAB40C-208ENST00000564703 IL36GQ9NZH8 169 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 ONECUT1Q9UBC0 465 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 IL36RNQ9UBH0 155 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 GHRLQ9UBU3 117 aa13.22□□□□□ -0.29
RAB40C-208ENST00000564703 FUOMA2VDF0 154 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 SIRPB1O00241 398 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 PDCD5O14737 125 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 FCN3O75636 299 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 OR2H2O95918 312 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 GP2P55259 537 aaKnown RBP13.21□□□□□ -0.29
RAB40C-208ENST00000564703 EDDM3BP56851 147 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 GRK1Q15835 563 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 SYT6Q5T7P8 510 aaPredicted RBP13.21□□□□□ -0.29
RAB40C-208ENST00000564703 LRRTM1Q86UE6 522 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 FAM185AQ8N0U4 392 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 OR8H2Q8N162 312 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 LY6G5BQ8NDX9 201 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 Q8NFD4 153 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 MRPS24Q96EL2 167 aaKnown RBP13.21□□□□□ -0.29
RAB40C-208ENST00000564703 ZNF696Q9H7X3 374 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 PLGRKTQ9HBL7 147 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 OPN4Q9UHM6 478 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 ST3GAL6Q9Y274 331 aa13.21□□□□□ -0.29
RAB40C-208ENST00000564703 FN1P02751 2386 aaKnown RBP13.21□□□□□ -0.3
RAB40C-208ENST00000564703 A0A0G2JK05 382 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 hCG_1809904A0A1W2PP81 198 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 A0A1W2PPE2 198 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 A0A1W2PR64 198 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 A0A1W2PRV1 198 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 MGST3O14880 152 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 UBBP0CG47 229 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 ADRA2CP18825 462 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 FPR2P25090 351 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 LMO1P25800 156 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 IL13RA2Q14627 380 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 CD200R1LQ6Q8B3 271 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 C1orf229Q6ZS94 237 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-208ENST00000564703 OR4M1Q8NGD0 313 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 OR4D6Q8NGJ1 314 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 OR51T1Q8NGJ9 327 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 C8orf46Q8TAG6 207 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 DACT3Q96B18 629 aaPredicted RBP13.2□□□□□ -0.3
RAB40C-208ENST00000564703 WDFY2Q96P53 400 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 STUB1Q9UNE7 303 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 AK6Q9Y3D8 172 aaKnown RBP13.2□□□□□ -0.3
RAB40C-208ENST00000564703 KPTNQ9Y664 436 aa13.2□□□□□ -0.3
RAB40C-208ENST00000564703 TMEM82A0PJX8 343 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 H3BUI4 141 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 ZNF737O75373 536 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 CD36P16671 472 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 HTR2CP28335 458 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 EDDM3AQ14507 147 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 PDCD1Q15116 288 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 C1orf100Q5SVJ3 147 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 C22orf42Q6IC83 251 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 C17orf107Q6ZR85 190 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 C1orf122Q6ZSJ8 110 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 LINC00596Q86U02 117 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 UPRTQ96BW1 309 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 CHST6Q9GZX3 395 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 CST11Q9H112 138 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 V9GY05 133 aa13.19□□□□□ -0.3
RAB40C-208ENST00000564703 NSD1Q96L73 2696 aaPredicted RBP13.19□□□□□ -0.3
RAB40C-208ENST00000564703 SETD2Q9BYW2 2564 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 TRAV1-2A0A0B4J238 106 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 hADV38S2A0JD32 116 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 PSPNO60542 156 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 CRTAPO75718 401 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 OR7C1O76099 320 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 HOXB4P17483 251 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 FGF9P31371 208 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 MEF2CQ06413 473 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 PIGYQ3MUY2 71 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 PAN3Q58A45 887 aaKnown RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 NHLRC3Q5JS37 347 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 ATAD3CQ5T2N8 411 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 GPR157Q5UAW9 335 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 TMEM200BQ69YZ2 307 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 Q6P435 159 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 KIR3DL3Q8N743 410 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 OR4S1Q8NGB4 309 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 OR6M1Q8NGM8 313 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 BARHL1Q9BZE3 327 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 MS4A7Q9GZW8 240 aaPredicted RBP13.18□□□□□ -0.3
RAB40C-208ENST00000564703 OCEL1Q9H607 264 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 C19orf12Q9NSK7 152 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 NUP50Q9UKX7 468 aa13.18□□□□□ -0.3
RAB40C-208ENST00000564703 NAV3Q8IVL0 2385 aa13.17□□□□□ -0.3
RAB40C-208ENST00000564703 M0R1W7 72 aa13.17□□□□□ -0.3
RAB40C-208ENST00000564703 RBM11P57052 281 aaKnown RBP13.17□□□□□ -0.3
RAB40C-208ENST00000564703 MPV17LQ2QL34 196 aa13.17□□□□□ -0.3
RAB40C-208ENST00000564703 TIMM50Q3ZCQ8 353 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms