RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 CRABP2P29373 138 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 PFN2P35080 140 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 TAS2R46P59540 309 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 CDK5Q00535 292 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 PAFAH1B3Q15102 231 aaKnown RBP2.77□□□□□ -1.97
LINC00560-201ENST00000564593 RBMY1FQ15415 496 aaKnown RBP2.77□□□□□ -1.97
LINC00560-201ENST00000564593 GABRA6Q16445 453 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 RPEL1Q2QD12 228 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 IGFL3Q6UXB1 125 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SLC16A13Q7RTY0 426 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 CMTM8Q8IZV2 173 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 KIF2BQ8N4N8 673 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 DNAAF3Q8N9W5 541 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 OR10G6Q8NH81 332 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 JOSD2Q8TAC2 188 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 ITFG1Q8TB96 612 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SUN5Q8TC36 379 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 PDCD6IPQ8WUM4 868 aaKnown RBP2.77□□□□□ -1.97
LINC00560-201ENST00000564593 TOP1MTQ969P6 601 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SGTBQ96EQ0 304 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 CERS2Q96G23 380 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SMARCD1Q96GM5 515 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 CSPG4P5Q96PW8 444 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 RBBP8Q99708 897 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SPIN2AQ99865 258 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SPIN2BQ9BPZ2 258 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 MED10Q9BTT4 135 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 FGF23Q9GZV9 251 aaPredicted RBP2.77□□□□□ -1.97
LINC00560-201ENST00000564593 LRRC42Q9Y546 428 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 GMEB1Q9Y692 573 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 MICAL3Q7RTP6 2002 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 PLXNA3P51805 1871 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 NUP205Q92621 2012 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 IGHV3OR16-9A0A0B4J2B5 98 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 SMIM31A0A1B0GVY4 71 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 LRCOL1A6NCL2 159 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 GOLGA8RI6L899 631 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 RTL8CO15255 209 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 YKT6O15498 198 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 SOCS1O15524 211 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 CHST10O43529 356 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 PLIN3O60664 434 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 SMIM24O75264 130 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 SCELO95171 688 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 SNAI1O95863 264 aaPredicted RBP2.76□□□□□ -1.97
LINC00560-201ENST00000564593 OXTP01178 125 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 LINC00869P0C866 280 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 C1GALT1C1LP0DN25 315 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 RAB5AP20339 215 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 BGNP21810 368 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 TUBG1P23258 451 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 MYL9P24844 172 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 NUP62P37198 522 aaPredicted RBP2.76□□□□□ -1.97
LINC00560-201ENST00000564593 TALDO1P37837 337 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 OPRK1P41145 380 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 AQP5P55064 265 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 CACNG7P62955 275 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 CRADDP78560 199 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 PPIDQ08752 370 aaKnown RBP2.76□□□□□ -1.97
LINC00560-201ENST00000564593 ADIGQ0VDE8 80 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 MED21Q13503 144 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 BRMS1LQ5PSV4 323 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 KHDRBS2Q5VWX1 349 aaKnown RBP2.76□□□□□ -1.97
LINC00560-201ENST00000564593 AP1ARQ63HQ0 302 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 RWDD4Q6NW29 188 aaKnown RBP2.76□□□□□ -1.97
LINC00560-201ENST00000564593 WDR82Q6UXN9 313 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 ATPAF2Q8N5M1 289 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 OR5AR1Q8NGP9 310 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF461Q8TAF7 563 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 UBA3Q8TBC4 463 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 OPTNQ96CV9 577 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 TRIM4Q9C037 500 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 DRC3Q9H069 523 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 TUBG2Q9NRH3 451 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 RGS18Q9NS28 235 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF282Q9UDV7 671 aaPredicted RBP2.76□□□□□ -1.97
LINC00560-201ENST00000564593 Q9Y3F1 56 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 RHBDD3Q9Y3P4 386 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 NLRC5Q86WI3 1866 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 DOCK8Q8NF50 2099 aa2.76□□□□□ -1.97
LINC00560-201ENST00000564593 SCN10AQ9Y5Y9 1956 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 A0A0J9YYE9 177 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 LOC100506127A0A0U1RQW1 187 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 C5orf63A6NC05 138 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 BBIP1A8MTZ0 92 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 HSBP1L1C9JCN9 74 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 H0YJW9 148 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 H0YJX3 145 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 K7ERQ8 282 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF701M0R085 212 aaPredicted RBP2.75□□□□□ -1.97
LINC00560-201ENST00000564593 PIRO00625 290 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ERI3O43414 337 aaKnown RBP2.75□□□□□ -1.97
LINC00560-201ENST00000564593 HSBP1O75506 76 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 TNFAIP8O95379 198 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 TRBC1P01850 177 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 GLAP06280 429 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 RBP1P09455 135 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF688P0C7X2 276 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF806P0C7X5 589 aa2.75□□□□□ -1.97
LINC00560-201ENST00000564593 ZNF286BP0CG31 522 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms