RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 SCML1Q9UN30 329 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 SYNMO15061 1565 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ABCA8O94911 1581 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ZFYVE16Q7Z3T8 1539 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 LRRC7Q96NW7 1537 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 A0A0G2JMP0 313 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 A0A0X1KG70 313 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 A0A1B0GXF2 115 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ZNF324O75467 553 aaPredicted RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 SCO1O75880 301 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ATP5HO75947 161 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 IGKV1-39P01597 117 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 IGKV1D-39P04432 117 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 IGKV5-2P06315 115 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 HLA-GP17693 338 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 GCLMP48507 274 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 XKP51811 444 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 AQP5P55064 265 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 CMC4P56277 68 aaPredicted RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 BAXQ07812 192 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 FLOT2Q14254 428 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 PTGES3Q15185 160 aaKnown RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 LINC00483Q53H64 154 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 FAM71E1Q6IPT2 247 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 OR2AE1Q8NHA4 323 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 SYNPRQ8TBG9 265 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 NELFBQ8WX92 580 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 CCL17Q92583 94 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 DOK1Q99704 481 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 TSGA10Q9BZW7 698 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ASB7Q9H672 318 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 DIABLOQ9NR28 239 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 IL37Q9NZH6 218 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 RAPGEF6Q8TEU7 1601 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 RNF17Q9BXT8 1623 aaKnown RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 WRNQ14191 1432 aaPredicted RBP eCLIP1.55□□□□□ -2.16
CHD9-209ENST00000564255 C9orf84Q5VXU9 1444 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 NWD1Q149M9 1564 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 CFAP74Q9C0B2 1584 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 REREQ9P2R6 1566 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 MYO10Q9HD67 2058 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 A8MWL6 223 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 UPK2O00526 184 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 UBDO15205 165 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 MPZL1O95297 269 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 SYT1P21579 422 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 TUFMP49411 452 aaKnown RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 SLC18A1P54219 525 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 VBP1P61758 197 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 TRAM1Q15629 374 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 TRIP13Q15645 432 aaPredicted RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 TMEM249Q2WGJ8 235 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 OR10J3Q5JRS4 329 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 PRNTQ86SH4 94 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 NT5DC3Q86UY8 548 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 CYP4Z1Q86W10 505 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ZNF101Q8IZC7 436 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 CYP4Z2PQ8N1L4 340 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 BLNKQ8WV28 456 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ZMYND19Q96E35 227 aaPredicted RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 RBMXL1Q96E39 390 aaKnown RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 SPIN2AQ99865 258 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 SPIN2BQ9BPZ2 258 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 ZSCAN16Q9H4T2 348 aaPredicted RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 PARP11Q9NR21 331 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 KLF13Q9Y2Y9 288 aaPredicted RBP1.55□□□□□ -2.16
CHD9-209ENST00000564255 ADCY9O60503 1353 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 KDM5DQ9BY66 1539 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 WIZO95785 1651 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 CUL7Q14999 1698 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 SCN4AP35499 1836 aa1.55□□□□□ -2.16
CHD9-209ENST00000564255 CAMSAP1Q5T5Y3 1602 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 SETBP1Q9Y6X0 1596 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 IGKV6D-41A0A0C4DH26 115 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 TMEM210A6NLX4 147 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 OR5K4A6NMS3 321 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 TOR1AO14656 332 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 TRAPPC3O43617 180 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 RCBTB2O95199 551 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 MRPL3P09001 348 aaKnown RBP1.54□□□□□ -2.16
CHD9-209ENST00000564255 TSPOP30536 169 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 PPP1R2P41236 205 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 PRKCDQ05655 676 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ADIGQ0VDE8 80 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 FADDQ13158 208 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 DMC1Q14565 340 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ZNF404Q494X3 552 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 ATP6AP1LQ52LC2 224 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 SAPCD1Q5SSQ6 148 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 LCE3EQ5T5B0 92 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 HBMQ6B0K9 141 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 PPP1R2P3Q6NXS1 205 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 CCNYL1Q8N7R7 359 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 FAM57AQ8TBR7 257 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 FAM45AQ8TCE6 357 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 IFT81Q8WYA0 676 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 RNF157Q96PX1 679 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 CDX2Q99626 313 aaPredicted RBP1.54□□□□□ -2.16
CHD9-209ENST00000564255 ZNF251Q9BRH9 671 aa1.54□□□□□ -2.16
CHD9-209ENST00000564255 API5Q9BZZ5 524 aaKnown RBP1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms