RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 ADAT3Q96EY9 351 aaPredicted RBP15.31■□□□□ 0.04
GDE1-203ENST00000564172 FAM71F1Q96KD3 344 aaPredicted RBP15.31■□□□□ 0.04
GDE1-203ENST00000564172 OR10A4Q9H209 315 aa15.31■□□□□ 0.04
GDE1-203ENST00000564172 TREM1Q9NP99 234 aa15.31■□□□□ 0.04
GDE1-203ENST00000564172 TMEM100Q9NV29 134 aa15.31■□□□□ 0.04
GDE1-203ENST00000564172 CKLFQ9UBR5 152 aa15.31■□□□□ 0.04
GDE1-203ENST00000564172 A6NIN4 97 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 ZZEF1O43149 2961 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 BCL2L11O43521 198 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 CGAP01215 116 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 IL2RAP01589 272 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 TMIGD3P0DMS9 266 aaPredicted RBP15.3■□□□□ 0.04
GDE1-203ENST00000564172 ACKR3P25106 362 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 OR2B8PP59922 312 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 MRPS10P82664 201 aaKnown RBP15.3■□□□□ 0.04
GDE1-203ENST00000564172 DGCR2P98153 550 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 GFRALQ6UXV0 394 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 DOK3Q7L591 496 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 NAXEQ8NCW5 288 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 OR1J2Q8NGS2 313 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 SMIM4Q8WVI0 70 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 LYZL4Q96KX0 146 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 ABRACLQ9P1F3 81 aa15.3■□□□□ 0.04
GDE1-203ENST00000564172 HSBP1L1C9JCN9 74 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 PRRG2O14669 202 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 ARPC1BO15143 372 aaKnown RBP15.29■□□□□ 0.04
GDE1-203ENST00000564172 METTL15P1P0C7V9 234 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 GDNFP39905 211 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 PLPP7Q8NBV4 271 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 WDR89Q96FK6 387 aaPredicted RBP15.29■□□□□ 0.04
GDE1-203ENST00000564172 OR10A2Q9H208 303 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 PRORYQ9H606 182 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 HRASLSQ9HDD0 168 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 PROCRQ9UNN8 238 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 INTS1Q8N201 2190 aaKnown RBP15.29■□□□□ 0.04
GDE1-203ENST00000564172 LOC100509620A0A075B734 347 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 LYZL6O75951 148 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 LCATP04180 440 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 H2BFSP57053 126 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 PJVKQ0ZLH3 352 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 HMGN3Q15651 99 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 DOLPP1Q86YN1 238 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 GABRG1Q8N1C3 465 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 ZNF610Q8N9Z0 462 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 OR51A2Q8NGJ7 313 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 GAL3ST2Q9H3Q3 398 aa15.29■□□□□ 0.04
GDE1-203ENST00000564172 RP1L1Q8IWN7 2480 aaPredicted RBP15.29■□□□□ 0.04
GDE1-203ENST00000564172 RAD51DO75771 328 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 SNRPBP14678 240 aaKnown RBP15.28■□□□□ 0.04
GDE1-203ENST00000564172 COX5AP20674 150 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 CPT2P23786 658 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 MTFR2Q6P444 385 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 OR14K1Q8NGZ2 314 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 NANOS1Q8WY41 292 aaKnown RBP15.28■□□□□ 0.04
GDE1-203ENST00000564172 ZFP3Q96NJ6 502 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 TMEM208Q9BTX3 173 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 TMEM127O75204 238 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 CEACAM8P31997 349 aaPredicted RBP15.28■□□□□ 0.04
GDE1-203ENST00000564172 F2RL1P55085 397 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 KLRB1Q12918 225 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 GABRA6Q16445 453 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 ZNF584Q8IVC4 421 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 OR56B1Q8NGI3 324 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 OR5D14Q8NGL3 314 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 ZNF835Q9Y2P0 537 aa15.28■□□□□ 0.04
GDE1-203ENST00000564172 DSPP15924 2871 aaKnown RBP15.28■□□□□ 0.04
GDE1-203ENST00000564172 ZGRF1Q86YA3 2104 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 HKR1P10072 659 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 CLDN12P56749 244 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 PLP2Q04941 152 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 SFRP4Q6FHJ7 346 aaPredicted RBP15.27■□□□□ 0.04
GDE1-203ENST00000564172 OR10K2Q6IF99 312 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 Q6ZSR3 168 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 ZNF546Q86UE3 836 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 ZNF671Q8TAW3 534 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 S100A13Q99584 98 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 SUCNR1Q9BXA5 334 aa15.27■□□□□ 0.04
GDE1-203ENST00000564172 SPTA1P02549 2419 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 ELOA3CA0A087WX78 387 aaPredicted RBP15.27■□□□□ 0.03
GDE1-203ENST00000564172 MEGF11A6BM72 1044 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 DHRS3O75911 302 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 GLI4P10075 376 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 CCL2P13500 99 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 ZNF20P17024 532 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 LUMP51884 338 aaPredicted RBP15.27■□□□□ 0.03
GDE1-203ENST00000564172 SPOCK1Q08629 439 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 OLFML2AQ68BL7 652 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 MDP1Q86V88 176 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 PNLDC1Q8NA58 520 aaKnown RBP15.27■□□□□ 0.03
GDE1-203ENST00000564172 OR2AK2Q8NG84 335 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 OR4A4PQ8NGN8 299 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 OR2AE1Q8NHA4 323 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 C1QTNF5Q9BXJ0 243 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 V9GYS6 101 aa15.27■□□□□ 0.03
GDE1-203ENST00000564172 C5orf49A4QMS7 147 aa15.26■□□□□ 0.03
GDE1-203ENST00000564172 HSPA12AO43301 675 aa15.26■□□□□ 0.03
GDE1-203ENST00000564172 YIF1AO95070 293 aa15.26■□□□□ 0.03
GDE1-203ENST00000564172 CD37P11049 281 aa15.26■□□□□ 0.03
GDE1-203ENST00000564172 CCNOP22674 350 aa15.26■□□□□ 0.03
GDE1-203ENST00000564172 EIF5AP63241 154 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms